| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1420 |
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| Symbol | |
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| ID | 5192440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1590035 |
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| End bp | 1591237 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585885 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_001266762 |
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| Protein GI | 148546660 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.909513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCAC GCAGCCCCAC GTCCCATGCC GTCACTGGGC AAGTCGTCTC CATCGTCCTG
TTCACCTTCA TCGGCTACCT GAACATCGGC ATCCCCCTGG CCGTGTTGCC CGGCTATGTG
CACAACGACC TGGGTTTCAG TGCCGTGGTC GCCGGCCTGG TGATCAGCGT GCAGTACCTC
GCGACGCTGC TCAGCCGCCC TGGCTCCAGC CGCATCATCG ACAACCACGG CAGCAAGAAG
GCGGTCATGT ACGGACTGGC TGGCTGCGGG CTCAGCGGGG TATTCATGCT GGCCTGTGCC
TTCCTCACTC ACCTACCTTG GTTGAGCCTG GCTTGCCTGC TGGTCGGTCG CCTGGTGCTG
GGCAGCGCCG AAAGCCTGGT AGGCTCGGGT GCGATCGGCT GGGGCATTGG CCGGGTGGGT
GCCGCAAACA CGGCCAAGGT CATCTCCTGG AACGGCATCG CCAGCTATGG TGCGCTGGCC
ATCGGCGCCC CACTGGGCGT GCTGATGGTC AAAGGCCTCG GGCTGTGGAG CATGGGTGTG
AGCATCATCC TGCTGTGCAT ACTCGGTTTG CTACTGGCGT GGCCCAAGCA AGCCGCCCCC
ATCGTCAGCG GTGTACGCCT GCCGTTCCTG CGGGTGCTGG GCAAGGTATT CCCCCATGGC
TCGGGGCTTG CCCTGGGCTC GATCGGCTTT GGCACCATCG CCACCTTCAT CACCCTTTAC
TACGCAAGCC GTGGCTGGGC CAATGCGGCG CTGACCCTGA GCCTGTTCGG CGCCAGTTTC
ATCAGCGCAC GGCTGCTCTT TGGCAACCTG ATCAATCGCA TCGGTGGCTT CAGGGTGGCG
ATCGCCTGCC TGTCGGTGGA AACGCTCGGG CTGTTGATGC TGTGGCTGGC ACCCAACGCC
GAACTGGCCT TGGCGGGGGC TGCATTGAGC GGGTTTGGTT TCTCGCTGGT GTTTCCGGCA
TTGGGCGTGG AGGCGGTGAA CCAGGTGTCG GCAGCTAACC GTGGGGCAGC GGTGGGAGCG
TATTCGCTGT TCATCGACTT GTCACTGGGG GTGACCGGGC CATTGGTCGG TGCGGTGGCG
GCGGGGTTCG GCTTCGCTTC GATGTTTCTG TTCGCGGCGG CTGCGGCAGC GTGTGGGTTG
GTATTGAGCC TCTATTTGTA CCGCCAGGGG CGTCGGGACA GGGACCGTAC AACAGCAGCC
TGA
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| Protein sequence | MPARSPTSHA VTGQVVSIVL FTFIGYLNIG IPLAVLPGYV HNDLGFSAVV AGLVISVQYL
ATLLSRPGSS RIIDNHGSKK AVMYGLAGCG LSGVFMLACA FLTHLPWLSL ACLLVGRLVL
GSAESLVGSG AIGWGIGRVG AANTAKVISW NGIASYGALA IGAPLGVLMV KGLGLWSMGV
SIILLCILGL LLAWPKQAAP IVSGVRLPFL RVLGKVFPHG SGLALGSIGF GTIATFITLY
YASRGWANAA LTLSLFGASF ISARLLFGNL INRIGGFRVA IACLSVETLG LLMLWLAPNA
ELALAGAALS GFGFSLVFPA LGVEAVNQVS AANRGAAVGA YSLFIDLSLG VTGPLVGAVA
AGFGFASMFL FAAAAAACGL VLSLYLYRQG RRDRDRTTAA
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