| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1418 |
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| Symbol | |
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| ID | 5193054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1585845 |
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| End bp | 1586729 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585883 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001266760 |
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| Protein GI | 148546658 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.380241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTACC GCCACCTGAC CCCATCCATG TCACTGCTGC TGGCTTTCGA GGCCGCCGCC
CGGCATGAAA GCTACACCCG CGCCGCCGCC GAACTGTCGC TGACCCAAAG CGCGGTCAGC
CGCCAGGTGC AAGCCTTGGA GCAGCAGTTG GGCCTGACCC TGTTCCGCCG CGAGGGGCGC
CAGGTGCAGC TGACCGATGT CGGCCGCCTG TACCAGCGCG AGCTCAGCGA GGCACTGGGG
CGCATCCGCA GCGCCACCTT GCAGGCACTG GCCTATCAGT CGGGGGTAGG CACCTTGCGC
CTGGCTACCC TGCCAACCTT CGGCTCGAAA TGGCTGTTGC CGAGGCTGCA TGCGTTCTAC
AGCGCTCACC CAGGCATGCT GGTGCACATT CATTCACGCA TTGAAACCAT CAACTTCGAC
ACCAGCGAAA TCGATGCCGC CATCGGCGTG GCCAGCCACG ACTTGCCGGG GCTTGTCTGC
CATCGCCTGC ATGCCGAGGA GCTGGTGGTG ATCTTGCCGC CGGAGGCCGG CGTCGGCAGC
CAAGGCTGGA GCCCGGCGCG GATCAGTGAA GAGGTGCTGC TGAATGTGGC CAACAACCCG
CATGCGTGGG GCGAGTGGTT TTCCCATCAT GGCTTGCCGC ATCGGGCGAT GCGGCTGGGG
CCGAGTTTCG AGCTGACCTC GCACCTGATC CAGGCGGTAC GTGCCGGGAT CGGGATCGGG
CTGGTGCCGC GCATATTGGT GGAGGAGGAA CTGGCCAAGG GCGAGCTGTA CAGCCCTGGT
GTGGCGTTTG CCAGCCAGCG TAGTTATTAC CTGATCTACC CGCCGAGGAA TGAGGCGCTG
CCGTCGCTGC GGGCATTCAG GGGGTGGTTG CTGGAGCAGA TCTGA
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| Protein sequence | MNYRHLTPSM SLLLAFEAAA RHESYTRAAA ELSLTQSAVS RQVQALEQQL GLTLFRREGR
QVQLTDVGRL YQRELSEALG RIRSATLQAL AYQSGVGTLR LATLPTFGSK WLLPRLHAFY
SAHPGMLVHI HSRIETINFD TSEIDAAIGV ASHDLPGLVC HRLHAEELVV ILPPEAGVGS
QGWSPARISE EVLLNVANNP HAWGEWFSHH GLPHRAMRLG PSFELTSHLI QAVRAGIGIG
LVPRILVEEE LAKGELYSPG VAFASQRSYY LIYPPRNEAL PSLRAFRGWL LEQI
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