| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1417 |
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| Symbol | |
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| ID | 5193053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1584288 |
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| End bp | 1585706 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585882 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001266759 |
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| Protein GI | 148546657 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGAC AAAACATGCA TTCAGGCGAG CTAAAGCGGG GCCTGAAGAA CCGCCATATC
CAGTTGATCG CCCTCGGCGG TGCGATTGGT ACCGGCCTGT TCCTCGGCTC GGCTGGCGTG
ATGAAATCCG CCGGCCCGTC GATGATTCTT GGCTACGCCA TCTGCGGCTT CATCGCCTTC
ATGATCATGC GCCAGCTGGG TGAAATGATC GTCGAAGAGC CGGTGGCCGG CTCGTTCAGC
CATTTCGCCC ACACCTACTG GGGCGGTTTC GCCGGCTTCC TGTCGGGCTG GAACTGCTGG
GTGCTGTATA TCCTGGTGGG TATGTCGGAG CTTTCGGCGG TCGGCAAGTA TGTTCACTAC
TGGTGGCCGG AGATCCCCAC CTGGGTCACG GCGGCAGCAT TTTTCGTGCT GATCAACGCC
ATCAACCTGA TGAACGTGAA GTTCTTCGGT GAAGCCGAAT TCTGGTTCGC CATCATCAAA
GTGGTCGCCA TCGTCAGCAT GATCGGCCTG GGTGCTTACC TGCTGACCAG CGGCAGCGGC
GGCCCTGAAG CCACCGTGGC CAACCTGTGG TCACATGGCG GTTTCTTCCC CAACGGCGTC
AGCGGGCTGG TAATGGCCTT GGCTTTCATC ATGTTTTCCT TTGGTGGCCT GGAAATGCTC
GGCTTCACCG CCGCCGAGGC CGACAAGCCA AAGACCGTGA TCCCCAAAGC GATCAACCAG
GTCATCTACC GCATCCTGAT CTTCTATGTC GGTGCCCTGG TGGTGCTGCT GTCGCTGACC
CCGTGGGACA ACCTGGTCGC CAGCATCGAC GCCTCGGGAG GCAGCTACGG CAGCAGCCCG
TTCGTGCAAG TGTTCTCGCT GCTGGGCAGT GACGTGGCTG CCAACCTGCT GAACTTCGTG
GTGCTGACTG CGGCGCTGTC GGTGTACAAC AGTGGCACCT ACTGCAACGC CCGCATGCTG
TTGGGTATGG CCGAGCAGGG CGATGCCCCG GCGTCGCTGG CCAAGGTCGA CAAGCGGGGC
GTGCCAGTGC GTTCGATCCT GGTGTCGGCT GCCGTGACCT TCGTCGCCGT GCTGCTGAAC
TACCTGATGC CGCAAAACGC GCTGGAGCTG CTGATGTCGC TGGTCGTGGC CACTCTGGTG
ATCAACTGGG CGATGATCAG CTACTCGCAC CTGAAGTTCC GTCAGCACCT CGACCGTACC
GGCCAGAAGC CGCTGTTCAA GGCGCTGTGG TACCCGTACG GCAACTATGT GGTGCTGGCT
TTCGTGGTGC TGATTCTGGG CATCATGCTG ATGATCCCGG GCATCCAGGT GTCGGTGTAT
GCGATCCCGG TGTGGCTGCT TGCGATGTTG GCGGTGTACA TGGTCAAGTC GCGTCGCCAG
GTGAATGCGG GCGGTGCTGT TGAGACTGTG GCCAAGTAA
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| Protein sequence | MSGQNMHSGE LKRGLKNRHI QLIALGGAIG TGLFLGSAGV MKSAGPSMIL GYAICGFIAF
MIMRQLGEMI VEEPVAGSFS HFAHTYWGGF AGFLSGWNCW VLYILVGMSE LSAVGKYVHY
WWPEIPTWVT AAAFFVLINA INLMNVKFFG EAEFWFAIIK VVAIVSMIGL GAYLLTSGSG
GPEATVANLW SHGGFFPNGV SGLVMALAFI MFSFGGLEML GFTAAEADKP KTVIPKAINQ
VIYRILIFYV GALVVLLSLT PWDNLVASID ASGGSYGSSP FVQVFSLLGS DVAANLLNFV
VLTAALSVYN SGTYCNARML LGMAEQGDAP ASLAKVDKRG VPVRSILVSA AVTFVAVLLN
YLMPQNALEL LMSLVVATLV INWAMISYSH LKFRQHLDRT GQKPLFKALW YPYGNYVVLA
FVVLILGIML MIPGIQVSVY AIPVWLLAML AVYMVKSRRQ VNAGGAVETV AK
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