| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1413 |
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| Symbol | |
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| ID | 5195330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1580047 |
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| End bp | 1580712 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585878 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_001266755 |
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| Protein GI | 148546653 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0463136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCC TTTGGCGCTA TGAACAGGAC GATTACGTGA GCCAATTTTT CCAGATTCAT
CCGGAGAACC CACAAGCGCG CCTGATAAAA CAGGCCGTCG AGATCATCCG CAAGGGGGGC
GTGGTGGTGT ATCCGACGGA TTCGGCCTAT GCGCTGGGTT GCCAGATAGG CGACAAGTCG
GCAATCGAGC GGGTGCGGCG CCTGCGGGGG CTGGACAAGA CGCACAACTT CACCCTGATG
TGCTGCGACA TGTCGCAATT GGGGTTGTAT GCCAAGGTCG ACACCGGCAC TTTCCGCTTG
CTGAAGGCGC ATGTACCGGG GCCTTACACC TTCATTCTCA ACGGCACGCG TGAAGTGCCG
CGTCTGCTGT TGCACGATAA GCGTCGCACC ATCGGGCTGC GTGTACCGGA CCACGCCATC
ACCCTGGCCT TGCTGGCCGA GTTGGGCGAG CCACTGATGA GCGTCAGCCT GATCCTGCCG
GGCGACAGCG AGCCGATGAC CGACCCTTAC GAGATCCGTG AACGGCTGGA GCACCAAGTT
GACCTGGTGA TCGATGGCGG GTTCGGCGAC CTCAAGGCGT CGACCATCAT CGACCTGTCC
GGCGACGAGC CGGAACTGAT CCGCGAAGGT TGTGGCGACC CCACGCCGTT CCTGGTCAAC
GCGTGA
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| Protein sequence | MNSLWRYEQD DYVSQFFQIH PENPQARLIK QAVEIIRKGG VVVYPTDSAY ALGCQIGDKS
AIERVRRLRG LDKTHNFTLM CCDMSQLGLY AKVDTGTFRL LKAHVPGPYT FILNGTREVP
RLLLHDKRRT IGLRVPDHAI TLALLAELGE PLMSVSLILP GDSEPMTDPY EIRERLEHQV
DLVIDGGFGD LKASTIIDLS GDEPELIREG CGDPTPFLVN A
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