| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1404 |
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| Symbol | |
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| ID | 5195197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1573016 |
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| End bp | 1574470 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585869 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_001266746 |
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| Protein GI | 148546644 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0143112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.607881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTGC CGACCTTAAG GATCATTGGT TTCATCATCG GCATCTTCCT GATTACCCTG
GCCGTCGGCA TGGCCGTGCC CATGGCGACC CTGGTGATCT TCGAGCGCAC CGGTGACATG
CCGTCGTTTC TCTGGTCGAG CCTGATCACC TTCATCGCCG GCCTGGCCCT GGTGGTGCAG
GGGCGCCCGG AGCATGTACA CCTACGCCCA CGCGACATGT ACCTGCTGAC CGTCAGCAGC
TGGCTGGTGG TGTGCGTATT CGCCGCGCTA CCGTTCCTGC TGACCCAGCA CATCAGCTAC
ACCGACGCCT TCTTCGAAAG CATGTCAGGC ATCACCGCCA CTGGCGCTAC CGTACTCAGC
GGGCTCGATA ACATGTCACC GGGCATCCTC ATGTGGCGCT CGATGCTGCA CTGGCTCGGC
GGTATCGGTT TCATCGCCAT GGCGGTGGCG ATCCTGCCGC TGCTGCGCAT CGGCGGCATG
CGCCTGTTCC AGACCGAATC GTCCGACCGC TCGGAAAAAG TCATGCCGCG CTCGCACATG
GTCGCCAAGT CGATCGTGGC GGTTTACGTC GGTTTCTCCA TCCTTGGTGC GCTGGCCTTC
TGGTGGGCGG GCATGAGCCC GTTCGATGCG ATCAACCACG CCATGTCGGC TATCTCTACG
GGTGGGTTCT CCACCTCCGA CCAGTCGTTG GCAAAATGGG ATATCCCGGC CGTGCACTGG
GTGGCGGTGG TGGTGATGAT CATGGGCAGC CTGCCGTTCA CCCTTTACGT AGCCACCCTG
CGCGGCAACC GCAAGGCGCT GATTCGTGAC CAGCAGGTAC AAGGCTTGCT GGGCATGCTG
GTGGTCACCT GGCTGGTACT GGGCACCTGG TACTGGTACA GCACCAACCT GCACTGGCTC
GACGCCCTGC GCCACGTGGC GCTGAATGTG ACCTCTGTGG TCACCACCAC CGGTTTCGCC
CTGGGGGACT ACAGCCTGTG GGGCAACTTC TCGCTGATGC TGTTCTTCTA CCTGGGCTTC
GTTGGCGGCT GCTCTGGCTC GACCGCCGGC GGTATCAAGA TTTTCCGCTT CCAGGTGGCC
TACATCCTGC TGAAGGCCAG CCTCAACCAG CTGATTCACC CGCGCGCGGT GATCAAGCAA
AAATACAACG GTCATCGCCT CGATGAAGAC ATCGTGCGTT CGATCCTGAC GTTCTCGTTC
TTCTTCGCCA TCACCATTTG TGTCTTGGCG CTGCTGCTGT CGCTGCTGGG CGTGGACTGG
ATGACTGCGC TGACCGGTGC CGCCGGCACG GTTTCGGGTG TAGGCCCAGG CCTGGGTGAA
GTGATCGGCC CGTCGGGCAA CTACGCCACG CTGCCTGACG CGGCCAAATG GATTCTGGCG
GCCGGCATGC TGTTGGGTCG CCTGGAAATC ATCACGGTGT TGGTGTTGTG CATGCCGGCG
TTCTGGCGTC ACTGA
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| Protein sequence | MALPTLRIIG FIIGIFLITL AVGMAVPMAT LVIFERTGDM PSFLWSSLIT FIAGLALVVQ
GRPEHVHLRP RDMYLLTVSS WLVVCVFAAL PFLLTQHISY TDAFFESMSG ITATGATVLS
GLDNMSPGIL MWRSMLHWLG GIGFIAMAVA ILPLLRIGGM RLFQTESSDR SEKVMPRSHM
VAKSIVAVYV GFSILGALAF WWAGMSPFDA INHAMSAIST GGFSTSDQSL AKWDIPAVHW
VAVVVMIMGS LPFTLYVATL RGNRKALIRD QQVQGLLGML VVTWLVLGTW YWYSTNLHWL
DALRHVALNV TSVVTTTGFA LGDYSLWGNF SLMLFFYLGF VGGCSGSTAG GIKIFRFQVA
YILLKASLNQ LIHPRAVIKQ KYNGHRLDED IVRSILTFSF FFAITICVLA LLLSLLGVDW
MTALTGAAGT VSGVGPGLGE VIGPSGNYAT LPDAAKWILA AGMLLGRLEI ITVLVLCMPA
FWRH
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