| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1387 |
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| Symbol | |
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| ID | 5193966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1554501 |
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| End bp | 1555880 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585852 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_001266729 |
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| Protein GI | 148546627 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.557678 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTGG ACATCATTGT TGTAATGATC TACACCGCCG GCATGCTCGG GCTTGGCTGG
TATGGCATGC GCCGCGCGAA AACCCATGAA GACTACCTGG TAGCCGGGCG CAACCTAGGC
CCGGTGCTGT ACATGGGCAC CATGGCCACC ACCGTACTCG GTGGCGCTTC CACGGTCGGC
ACCGTACGCC TGGGCTACGT CCACGGCATT TCCGGCTTCT GGCTGTGCGC AGCCCTGGGC
CTGGGCATCA TCGCCATCAA CCTGTTCCTC GCCAAACCGC TGCTGCGCCT GCGCATCTTC
ACCGTGACCC AGGTACTGGA ACAGCGCTAC AACCCCACCG CACGCCAGGC CAGCGCCGTC
ATCATGCTGG CTTACGCGCT GATGATCGGG GTCACCTCGA CCCTGGCCAT GGCCACCGTC
CTGCAGGTGC TGCTGGACCT GCCGTTCTGG GCTTCGCTGA TGCTCGGCGG CGGCGTGGTA
GTGCTGTACT CGACCATCGG CGGCATGTGG TCGCTGACCC TGACCGATAT CGTCCAGTTC
GTGATCAAGA CCGTCGGCCT GATGTTCATC CTGCTGCCAG TGTGCCTGTA CAAGGCCGGT
GGTTGGGACA CCCTGGTGGC CAAACTGCCA GCGGCCAGCT TCCAGCTGAC TACCATTGGC
TGGGACACCA TCATCACTTA CTTCCTGATC TACTTCTTCG GCATCCTCAT CGGCCAGGAC
ATCTGGCAGC GAGTGTTCAC CGCCCGTGAC GAAAAGGTCT GTCAGCGAGC CGGCACCACC
GCCGGTGTGT ATTGCGTGCT GTATGGCCTG GCCTGTGCGG CGATCGGCAT GGCTGCGCAT
GTGCTGATGC CCGACCTGGC CAATCCGAAC AACGCCTTTG CCGAGATGAT CAAGACCACC
CTGCCCGATG GCATCCGTGG CCTGCTGATG GCCGCGGCCC TGGCGGCCAT GATGTCCACC
GCCAGCGCCG GTCTGCTGGC TGCCTCGACC ACCGTGACCG AAGACCTGCT GCCCAAGCTG
CGTGGCGGCA AGCAGTCGAG CCTGGGCACC AGCCGCCTGT TCACCCTGCT CACCGGCCTG
GTGGTGCTGG GCATCGCGCT GATGGTGAAT GATGTGATCA ACGCCCTGAC CCTGGCTTAC
AACCTGCTGG TCGGCGGCAT GCTGATCCCG CTGATCGGGG CGATCTTCTG GAAACGTGCG
ACCACCGCAG GCGCGATTGC CAGCATGTCG CTGGGCTTTG CCACTGCCCT GCTGTTCATG
TTCCTGGACG GGCTGGAGGC TAATACGCCG ATCTACTACA GCCTGGCAGT AGGGCTGGTG
AGCTTTGTGG GCGTGAGCCT GGTGTCGCGC AAGTCGGTGG CGGCGGTGAA GCTGGCCTGA
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| Protein sequence | MALDIIVVMI YTAGMLGLGW YGMRRAKTHE DYLVAGRNLG PVLYMGTMAT TVLGGASTVG
TVRLGYVHGI SGFWLCAALG LGIIAINLFL AKPLLRLRIF TVTQVLEQRY NPTARQASAV
IMLAYALMIG VTSTLAMATV LQVLLDLPFW ASLMLGGGVV VLYSTIGGMW SLTLTDIVQF
VIKTVGLMFI LLPVCLYKAG GWDTLVAKLP AASFQLTTIG WDTIITYFLI YFFGILIGQD
IWQRVFTARD EKVCQRAGTT AGVYCVLYGL ACAAIGMAAH VLMPDLANPN NAFAEMIKTT
LPDGIRGLLM AAALAAMMST ASAGLLAAST TVTEDLLPKL RGGKQSSLGT SRLFTLLTGL
VVLGIALMVN DVINALTLAY NLLVGGMLIP LIGAIFWKRA TTAGAIASMS LGFATALLFM
FLDGLEANTP IYYSLAVGLV SFVGVSLVSR KSVAAVKLA
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