| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1385 |
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| Symbol | |
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| ID | 5191693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1553228 |
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| End bp | 1554121 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585850 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001266727 |
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| Protein GI | 148546625 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.134108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.498861 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAATTCA GCCAACTGCG TATCTTTCAG GCCGTGGCCG AGGAAGGCTC GGTTACCCGC
GCCGCAGAGC GCCTGCACCG GGTGCCATCA AACCTCTCCA CGCGCCTGCG CCAACTCGAG
GAGCAACTGG GCGTCGAACT GTTCCTGCGC GAACGTCAGC GCCTGCAACT GTCGCCAGCA
GGCAAGGTGC TGCTGGACTA TGCCAACCGT ATGTCCGCCT TGCGCGACGA AGCGCTGGGC
GCCGTGCGTG GCGGTCAGCC GGCTGGGGAC TTCGTGCTGG GGACCATGTA CAGCACGGCG
GCGACCCACT TGCCGGCGTT GCTGGCGCGC TATCACCAGG CTTACCCGCA GGTGAACCTG
CAAGTGCGTG CAGCACCCAG CGGCGAGTTG CTTGAAGGGC TGTTGAACCA CTCCCTGGAT
GCTGCTCTTG TGGACGGGCC ACCGAGCCTT GCCGGGTTGG ATGGCGTGCC GCTGTGCGAT
GAGCAACTGG TACTGATCAC CAGCCCCGAG CACCCGGCGG TCCTCACCGC CAAGGACGTG
GCGGGCAAGG CGGTGTTCAC CTTCCGCCAG GGCTGCTCGT ACCGCATGCG CCTGGAGGCC
TGGTATGCCC ATGCCCATAC GCCGATGGGG CGGGTGATGG AGATCGAGTC GTACCAGAGC
ATGCTGGCCT GTGTGATCGC GGGTGCGGGT GTGGCGATGA TGGCCCAGTC GATGCTCGAC
AGCCTGCCTG GACGTGATCG GGTGAGGGTG CACCCGCTGC AGGCACCTTT CGATCAGGCG
GTCACCTGGC TGATGTGGCG CCAGGGTATG CGCGGGGCTA ATCTGCAGGC ATGGATCGAC
CTGCAACAAA GCGAAACGAT TAACCAGTCG TCGGAATGCG CCGCCACGGC TTGA
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| Protein sequence | MEFSQLRIFQ AVAEEGSVTR AAERLHRVPS NLSTRLRQLE EQLGVELFLR ERQRLQLSPA
GKVLLDYANR MSALRDEALG AVRGGQPAGD FVLGTMYSTA ATHLPALLAR YHQAYPQVNL
QVRAAPSGEL LEGLLNHSLD AALVDGPPSL AGLDGVPLCD EQLVLITSPE HPAVLTAKDV
AGKAVFTFRQ GCSYRMRLEA WYAHAHTPMG RVMEIESYQS MLACVIAGAG VAMMAQSMLD
SLPGRDRVRV HPLQAPFDQA VTWLMWRQGM RGANLQAWID LQQSETINQS SECAATA
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