Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1358 |
Symbol | |
ID | 5190700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1527555 |
End bp | 1527914 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640585823 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001266700 |
Protein GI | 148546598 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.660301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0940885 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTGA AGATAATTCC TAGCAGTAAG GCTGTTGTAC TTGAAGCCGG TGGGAAGAAG TCGAAGCAGT TAGTATCTTT AGAAAATTCT CCTAATTCGC AGGTGACCAT AACTTCTGTC ACGATGCTTC CGGGGGCAGT ATCGGAGGTG CATACCCATT CGGTTTCTGA GCAGATATGG GTAGTGCAGG CAGGGACGGC TGAATTGCTG CTAGCTGGTG AAGTCTGTCA TACTATTTCA TCAGGTGATG TTGTCATTAC CCCTCCAGGG ATGCAGCATG GAATTAGAAA TTCTGGAAAA GAAATTTTTT CTTACTTAAG TATTACAGCG CCACCTGAGG ATATGCGGAA ATATTACTAA
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Protein sequence | MAVKIIPSSK AVVLEAGGKK SKQLVSLENS PNSQVTITSV TMLPGAVSEV HTHSVSEQIW VVQAGTAELL LAGEVCHTIS SGDVVITPPG MQHGIRNSGK EIFSYLSITA PPEDMRKYY
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