| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1348 |
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| Symbol | |
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| ID | 5195417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1518113 |
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| End bp | 1519945 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585815 |
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| Product | ABC transporter related |
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| Protein accession | YP_001266692 |
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| Protein GI | 148546590 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.416951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.150129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTACC GCCGTTTCGA AAGACTGATC GATATTTTCC GCGAGGCACC GAGCGAAGCC
CCCCCGAGCA CGGTGTGGCC GTTCTACCTG TATTACCTGC GCCAGGTGTG GCCCAGCTTC
GTGGCCCTGC TGGTGGTCGG CCTGGTCGCC TCGCTGATCG AGGTGGCGAT GTTCAGCTAC
CTCAGCCGCA TCATCGACCT GGCCCAGGGT ACGCCCAATG CCAACTTCTT CAGCGAGCAC
AGCGGCGAGC TGATCTGGAT GCTGGTGGTG ATTCTGCTGC TGCGGCCATT GTTCTTCGGC
CTGCACGACC TGCTGGTGCA CCAGACCATC AACCCCGGCA TGACCAGCCT GATCCGCTGG
CAAAACCATA CCTATGTGCT CAAGCAGAGC CTGAACTTCT TTCAGAGCGA CTTCGCCGGG
CGTATTGCCC AGCGCATCAT GCAGACCGGC AACTCGCTGC GCGATTCCGC CGTGCAGGCG
GTGGACGCGC TATGGCATGT GCTGATCTAC GCCATCACCT CGCTGGTGCT GTTCGCCGAG
GCCGACTGGC GCCTGATGCT GCCGCTGCTG GCGTGGATCG TCAGCTACAT TGCCGCGCTG
TTCTACTTCG TGCCACGGGT CAAGGAGCGC TCGGTGGTGT CTTCGGACGC ACGCTCCAAG
CTGATGGGGC GTATCGTCGA CGGCTACACC AACATCGCAA CGCTGAAGCT GTTTGCCCAT
ACCGACTACG AACAGCAGTA TGCGCGTGAG GCAATCCGCG AGCAGACCGA GAAAACCCAG
CTGGCCTCCC GGGTGATCAC CAGCATGGAC GTGGTCATCA CCACCCTCAA TGGCTTGCTG
GTGGTCGCCA CCACCGGCCT TGCCCTGTGG CTGTGGAGCC AATCGCTGAT CACCGTGGGT
GCCATCGCCC TGGCCACTGG CCTGGTGATC CGCATCGTCA ACATGTCGGG CTGGATCATG
TGGGTGGTCA ACGGCATTTT CGAGAACATC GGCATGGTGC AGGACGGCCT GCAGACCATC
GCCCAGCCAG TCACCGTCAC CGACCTGCCC AATGCGCCGG CACTGAAGGT CAGCCGCGGC
GCGGTGCGTT TCGATGACGT CGACTTCCAT TACGGCAAGG CCACCAATGT CATAGAAGGG
CTCAACCTGG ACATCCGCCC GGGCGAGAAA ATCGGTTTGA TCGGCCCGTC CGGGGCAGGC
AAGTCGACCC TGGTCAACCT GCTGTTGCGC CTGTACGACG TGCAGGGTGG GCGCATCCTC
ATCGACGGCC AGGACATTGC CAAGGTGAGC CAGGCCAGCC TGCGTGCACA GATCGGCATG
ATCACCCAGG ATACCTCGCT GCTGCACCGT TCGATCCGCG AAAACCTGCT GTACGGCCGC
CCCGGTGCCA GCGATGCAGA ACTGCACGAA GCTGTGCGCC GCGCGCGGGC TGACGAGTTC
ATCCCACAGC TTTCGGATGC CCAGGGCCGC ACCGGTTTCG ATGCCCATGT GGGCGAACGC
GGGGTCAAGC TGTCGGGTGG CCAGCGCCAG CGTATCGCCA TTGCACGGGT GCTGCTGAAG
AACGCGCCGA TCCTGATCAT GGACGAGGCC ACCTCGGCGC TGGATTCGGA AGTGGAAGCG
GCGATCCAGG AAAGCCTGGA GACGCTGATG CAGGGCAAGA CGGTAATCGC CATTGCCCAC
CGGCTTTCCA CCATTGCCCG TATGGACCGG CTGGTGGTGC TGGACAAGGG GCGAATTGTC
GAGAGTGGCA GCCACAGTGA GTTGCTGGAG CAGCAAGGGC TGTATGCCCG GTTGTGGCAT
CACCAGACCG GAGGCTTTGT CGGGGTCGAT TGA
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| Protein sequence | MLYRRFERLI DIFREAPSEA PPSTVWPFYL YYLRQVWPSF VALLVVGLVA SLIEVAMFSY
LSRIIDLAQG TPNANFFSEH SGELIWMLVV ILLLRPLFFG LHDLLVHQTI NPGMTSLIRW
QNHTYVLKQS LNFFQSDFAG RIAQRIMQTG NSLRDSAVQA VDALWHVLIY AITSLVLFAE
ADWRLMLPLL AWIVSYIAAL FYFVPRVKER SVVSSDARSK LMGRIVDGYT NIATLKLFAH
TDYEQQYARE AIREQTEKTQ LASRVITSMD VVITTLNGLL VVATTGLALW LWSQSLITVG
AIALATGLVI RIVNMSGWIM WVVNGIFENI GMVQDGLQTI AQPVTVTDLP NAPALKVSRG
AVRFDDVDFH YGKATNVIEG LNLDIRPGEK IGLIGPSGAG KSTLVNLLLR LYDVQGGRIL
IDGQDIAKVS QASLRAQIGM ITQDTSLLHR SIRENLLYGR PGASDAELHE AVRRARADEF
IPQLSDAQGR TGFDAHVGER GVKLSGGQRQ RIAIARVLLK NAPILIMDEA TSALDSEVEA
AIQESLETLM QGKTVIAIAH RLSTIARMDR LVVLDKGRIV ESGSHSELLE QQGLYARLWH
HQTGGFVGVD
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