| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1342 |
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| Symbol | |
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| ID | 5193646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1508036 |
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| End bp | 1509415 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585809 |
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| Product | glutamate--putrescine ligase |
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| Protein accession | YP_001266686 |
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| Protein GI | 148546584 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0174] Glutamine synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.738876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.165008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAT TGATCATGCA CTTTGCCCCT GTAGAGCAGG CTACCCGTTT TCTGGCCGAC
AACCCCGATA TCGAGCTGTT CGAACTGTTC ATCCTCGACG CCAACGGTGT GCCACGCGGC
AAGCTGTTGC ACCGCGAGGA ACTGCTGGCC GTGTACCAGA CAGGCCGGCC ACTGCCCAGC
ACCATCCTTG GCCTGACCCT CAATGGCGAC GACGTGGAAA ACTCCGGCCT GGTGTGGGAC
GTAGGCGATA TCGACTGCCG TGCCTACCCG CTGGACGGCA GCCTGGTGCG GCTGCCCTGG
CGCCGGGTGC CCACCGCTGC AGTGCAGGTG AGCATGCACC CCAGCGAGGG GCTGCCGGCC
AGCATCGCGG ACCCACGCCA TGTGCTGCTG CGCACCATCG AAGCGTTGAA GGCCGATGGT
TACCACCCGG TGATGGCCTG CGAGCTGGAA TTCTACCTGC TTGACCAGCA GCGTGATGCC
CAGGGCCGCC CACAACCGGC ACTGGACAAC GATGGCGGTC GCCCACGCAG CACCCAGGTC
TATGGCCTGC GCGAACTGGA GCAGATCGAA CCGTTCCTCG CCGACCTGTA CGCTGCCTGC
AAGGCCCAAG GCATCCCGGC GCGCACGGCC ATTTCCGAGT ACGCCCCCGG CCAGGTGGAA
ATCACCCTGG AGCATGGCGA TGCGCTGCAG GCGATGGACC AGGCGGTGCG CTACAAGCGC
CTGGTAAAAG GTGTGGCCCA TGCCCACGGC ATGCAGGCCT GCTTCATGGC CAAGCCATTT
GCCCAACTGG CCGGCACCGG CATGCACATG CACCTGAGCC TGGCCGACAG CGCCGGCAAC
AACCTGTTCG CCAGCGAAGA CAAGGCCGGT ACCCCGCTGC TGCGCCAGGC CGTGGCCGGC
ATGCTGCGGC ACCTGCGCGA CTCGCTGCTG CTGTTCTGCC CCAACGCCAA CTCGTACCGA
CGTTTCCAGG CCAACAGCTA TGCGCCCCTG GCGCCAACCT GGGGCGTGGA CAACCGCACC
GTGAGCCTGC GTGTGCCAGG AGGCCCTGCC AACAGTCGCC ATGTGGAGCA CCGCATCTGT
GGCGCGGATG CCAACCCTTA CCTGGCTGCA GCGGCGATCC TCGCTGCCAG CCACCGCGGC
ATCCGCGAAC AGCTTGACCC AGGTGCCCCC GTTGAAGGCA ACGGTTACGC TCAGGCCACC
GAACACCTGC CCACCGACTG GCTGACCACC CTCGACGCCC TGCAACATTC CGAATGGGCC
CGTGAAGCAT TGGGCGAAGA CTTCCTTGGC GTGTACCTGA AGGTCAAGCG CGCCGAGTAC
CGCCAGTTCA TGGCTGAAGT CAGCGAACAG GACTGGCGCT GGTACCTGCA CCAGGCCTGA
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| Protein sequence | MSELIMHFAP VEQATRFLAD NPDIELFELF ILDANGVPRG KLLHREELLA VYQTGRPLPS
TILGLTLNGD DVENSGLVWD VGDIDCRAYP LDGSLVRLPW RRVPTAAVQV SMHPSEGLPA
SIADPRHVLL RTIEALKADG YHPVMACELE FYLLDQQRDA QGRPQPALDN DGGRPRSTQV
YGLRELEQIE PFLADLYAAC KAQGIPARTA ISEYAPGQVE ITLEHGDALQ AMDQAVRYKR
LVKGVAHAHG MQACFMAKPF AQLAGTGMHM HLSLADSAGN NLFASEDKAG TPLLRQAVAG
MLRHLRDSLL LFCPNANSYR RFQANSYAPL APTWGVDNRT VSLRVPGGPA NSRHVEHRIC
GADANPYLAA AAILAASHRG IREQLDPGAP VEGNGYAQAT EHLPTDWLTT LDALQHSEWA
REALGEDFLG VYLKVKRAEY RQFMAEVSEQ DWRWYLHQA
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