| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1340 |
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| Symbol | |
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| ID | 5193698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1504720 |
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| End bp | 1506417 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640585807 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001266684 |
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| Protein GI | 148546582 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0671762 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAA ATTTTTGGAA GGATAAGTAC CCAGCCGGGA TTACGGCGGA AATCAATCCT
GACGAATTCC CCAATATCCA GGCAGTACTC AAGCAATCCT GCCAACGCTT TGCCGACAAA
CCGGCCTTTA GCAACCTGGG CAAGACTATC ACTTATGGCG AGTTGTATGC GTTGTCGGGG
GCGTTTGCCG CCTGGTTGCA GCAGCATACC GACCTCAAGC CGGGTGACCG CATTGCCGTG
CAACTGCCCA ATGTCCTGCA ATACCCGGTC GCGGTCTTCG GTGCCATGCG TGCCGGGCTG
ATCGTGGTCA ACACCAACCC GCTGTACACC GCGCGGGAAA TGGAACACCA GTTCAACGAC
TCGGGTGCCA AGGCCTTGGT GTGCCTGGCC AACATGGCCC ACCTGGCCGA AAAAGTGGTG
CCCAAAACCC AGGTCAGGCA CGTTATCGTC ACCGAAGTGG CCGACCTGCT GCCGCCACTC
AAGCGCCTGC TGATCAACAG CGTGATCAAG TACGTGAAGA AGATGGTGCC GGCCTACAAC
CTGCCGCAGG CCGTGCGTTT CAATGACGCC CTGGCGCTGG GCAAGGGCCA GCCCGTGACC
GAAGCCAACC CGCAGGCCAA CGACGTGGCG GTGCTGCAAT ACACCGGCGG TACCACCGGC
GTGGCCAAAG GCGCCATGCT GACCCACCGC AACCTGGTGG CCAACATGCT GCAGTGCCGG
GCACTGATGG GCGCCAACCT GCACGAAGGC TGCGAAATCC TCATCACCCC GCTGCCGCTG
TACCACATCT ATGCGTTTAC CTTCCATTGC ATGGCGATGA TGCTGATCGG CAACCACAAC
GTGCTGATCA GCAACCCGCG AGACTTGCCG GCAATGGTCA AGGAACTGGG CAAGTGGAAG
TTCAGCGGCT TTGTGGGCCT CAACACCCTG TTCGTTGCCC TGTGCAATAA CGAGGCGTTC
CGAGCCCTGG ATTTCTCGGC GCTGAAAATT ACCCTGTCGG GCGGCATGGC CTTGCAGCTA
AGCGTGGCCG AGCGCTGGAA GGCCGTTACC GGTTGCGCCA TCTGCGAAGG CTACGGCATG
ACCGAAACCA GCCCGGTGGC GGCGGTGAAC CCGTCGGAAG CGAACCAGGT GGGCACCATC
GGTATTCCGG TGCCGTCGAC CTTGTGCAAG GTCATCGACG ACGCCGGCAA TGAGCTGCCG
CTTGGCGAAG TGGGCGAGCT GTGTGTCAAG GGCCCGCAGG TGATGAAGGG CTACTGGCAG
CGTGAAGACG CCACGGCTGA GATTCTCGAC AGCGAAGGCT GGCTGAAGAC CGGTGACATC
GCCGTGATCC AGGCGGACGG CTACATGCGC ATCGTCGACC GCAAGAAAGA CATGATCCTG
GTCTCGGGCT TCAACGTGTA CCCCAACGAG CTGGAAGACG TGTTGGCGGC CTTGCCGGGC
GTGCTGCAGT GCGCTGCCAT CGGTGTGCCG GACGAGAAGT CGGGTGAAGT GATCAAGGTC
TTCATCGTGG TCAAACCGGG CATGACCGTG ACCAAGGAGC AGGTGATGGA GCACATGCGT
GCCAACGTCA CCGGCTACAA GGTACCGCGC CACATCGAGT TCCGCGACTC GCTGCCTACC
ACCAACGTGG GCAAGATCCT GCGCCGCGAA CTGCGTGATG AAGAGCTCAA GAAGCAAGGC
TTGAAGAAGA TCGCCTGA
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| Protein sequence | MIENFWKDKY PAGITAEINP DEFPNIQAVL KQSCQRFADK PAFSNLGKTI TYGELYALSG
AFAAWLQQHT DLKPGDRIAV QLPNVLQYPV AVFGAMRAGL IVVNTNPLYT AREMEHQFND
SGAKALVCLA NMAHLAEKVV PKTQVRHVIV TEVADLLPPL KRLLINSVIK YVKKMVPAYN
LPQAVRFNDA LALGKGQPVT EANPQANDVA VLQYTGGTTG VAKGAMLTHR NLVANMLQCR
ALMGANLHEG CEILITPLPL YHIYAFTFHC MAMMLIGNHN VLISNPRDLP AMVKELGKWK
FSGFVGLNTL FVALCNNEAF RALDFSALKI TLSGGMALQL SVAERWKAVT GCAICEGYGM
TETSPVAAVN PSEANQVGTI GIPVPSTLCK VIDDAGNELP LGEVGELCVK GPQVMKGYWQ
REDATAEILD SEGWLKTGDI AVIQADGYMR IVDRKKDMIL VSGFNVYPNE LEDVLAALPG
VLQCAAIGVP DEKSGEVIKV FIVVKPGMTV TKEQVMEHMR ANVTGYKVPR HIEFRDSLPT
TNVGKILRRE LRDEELKKQG LKKIA
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