Gene Pput_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1337 
Symbol 
ID5191922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1501044 
End bp1501514 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content61% 
IMG OID640585804 
Productdehydratase 
Protein accessionYP_001266681 
Protein GI148546579 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.574177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.282303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGG TCACCAACAC GCCTTACGAA GCCCTCGAAG TCGGCCAGAA GGCCGAGTAC 
AAGAAGTCCG TTGAAGAACG CGACATCCAG CTGTTCGCTG CGATGTCCGG TGACCACAAC
CCGGTTCACC TGGATGCCGA ATTCGCCGCC AAGAGCATGT TCCGCGAACG TATTGCCCAC
GGCATGTTCA GCGGCGCGCT GATCAGTGCT GCAGTGGCCT GCACACTGCC TGGCCCTGGC
ACCATCTACC TGGGCCAACA GATGAGCTTC CAGAAGCCGG TGAAAATTGG CGACACCCTG
ACCGTGCGCC TGGAAATCCT CGAGAAGCTG CCCAAGTTCA AGGTGCGCAT CGCCACCAAC
GTCTACAACC AGAACGACGA GCTGGTGGTC GCGGGTGAAG CCGAGATCCT GGCGCCGCGT
AAGCAGCAGA CCGTCGAGCT GGTGTCGCCG CCGAATTTTG TGGCGAGCTG A
 
Protein sequence
MSQVTNTPYE ALEVGQKAEY KKSVEERDIQ LFAAMSGDHN PVHLDAEFAA KSMFRERIAH 
GMFSGALISA AVACTLPGPG TIYLGQQMSF QKPVKIGDTL TVRLEILEKL PKFKVRIATN
VYNQNDELVV AGEAEILAPR KQQTVELVSP PNFVAS