Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1337 |
Symbol | |
ID | 5191922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1501044 |
End bp | 1501514 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640585804 |
Product | dehydratase |
Protein accession | YP_001266681 |
Protein GI | 148546579 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.574177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.282303 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCAGG TCACCAACAC GCCTTACGAA GCCCTCGAAG TCGGCCAGAA GGCCGAGTAC AAGAAGTCCG TTGAAGAACG CGACATCCAG CTGTTCGCTG CGATGTCCGG TGACCACAAC CCGGTTCACC TGGATGCCGA ATTCGCCGCC AAGAGCATGT TCCGCGAACG TATTGCCCAC GGCATGTTCA GCGGCGCGCT GATCAGTGCT GCAGTGGCCT GCACACTGCC TGGCCCTGGC ACCATCTACC TGGGCCAACA GATGAGCTTC CAGAAGCCGG TGAAAATTGG CGACACCCTG ACCGTGCGCC TGGAAATCCT CGAGAAGCTG CCCAAGTTCA AGGTGCGCAT CGCCACCAAC GTCTACAACC AGAACGACGA GCTGGTGGTC GCGGGTGAAG CCGAGATCCT GGCGCCGCGT AAGCAGCAGA CCGTCGAGCT GGTGTCGCCG CCGAATTTTG TGGCGAGCTG A
|
Protein sequence | MSQVTNTPYE ALEVGQKAEY KKSVEERDIQ LFAAMSGDHN PVHLDAEFAA KSMFRERIAH GMFSGALISA AVACTLPGPG TIYLGQQMSF QKPVKIGDTL TVRLEILEKL PKFKVRIATN VYNQNDELVV AGEAEILAPR KQQTVELVSP PNFVAS
|
| |