| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1330 |
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| Symbol | |
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| ID | 5194597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1496705 |
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| End bp | 1497241 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585797 |
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| Product | peptide deformylase |
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| Protein accession | YP_001266674 |
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| Protein GI | 148546572 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.290852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGTG ACATTCTCAA GATGGGCGAC GAACGCCTGC TGCGCATCGC TCCGCCAGTG
CCCGAGCACA TGTTTGGCAG TGCCGAACTG CAGCAACTGA TCGACGACAT GTTCGAAACC
ATGCGTCACG TAGGCGGTGT GGGGCTGGCC GCCCCGCAGA TCGGCATCGA CCTGCAGTTG
GTGATCTTCG GCTTCGAGCG CAGCGAGCGA TACCCCGATG CCGAGGCGGT GCCGCAGACC
ATTCTGCTGA ATCCGGTCAT CACCCCGACC TCAAGCGAGA TCGAGGACGG CTGGGAAGGT
TGTCTGTCGG TGCCTGGCTT GCGCGGCGTG GTGCCGCGCT TCAAGCATAT CGGCTACCAG
GGCATCGACC CCCAGGGCAA CCCGATCAAC CGCTTTGCCG ATGGCTTTCA TGCGCGGGTG
GTGCAGCACG AGTGCGACCA CCTGATCGGC CGGCTATACC CCTCGCGCAT CCAGGACTTT
TCCAGGTTCG GCTACACCGA GGTGCTGTTC CCTGGGCTCG AGGTCAGCGA CGACTGA
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| Protein sequence | MIRDILKMGD ERLLRIAPPV PEHMFGSAEL QQLIDDMFET MRHVGGVGLA APQIGIDLQL
VIFGFERSER YPDAEAVPQT ILLNPVITPT SSEIEDGWEG CLSVPGLRGV VPRFKHIGYQ
GIDPQGNPIN RFADGFHARV VQHECDHLIG RLYPSRIQDF SRFGYTEVLF PGLEVSDD
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