| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1329 |
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| Symbol | |
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| ID | 5194596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1495749 |
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| End bp | 1496705 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640585796 |
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| Product | putative ribonuclease BN |
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| Protein accession | YP_001266673 |
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| Protein GI | 148546571 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.309045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTCC CCGACCTGCG CGGCTTGCCC CTGCACCGCG TGCTGGTTCG CACCGTCAAG
GAATTCCTCG ACGACGAGAT GTCCACCTAT GCCTCAGCGC TGGCCTACCA GGCGCTGTTC
TCGCTATTCC CCTTCCTGTT GTTCCTGATT GCCCTGATCG GTTTCCTGCA CTTGCCGGAC
TTTTTCTCCT GGCTGCGTCT GCAATCGGAA CTGGTGTTAC CGCCCCAGGC GCTGGAGCAG
GTGAACCCGG TGATCGACCA GTTGCAACAA TCCAAGGGCG GGCTGCTGTC GGTGGGTATC
GTGATCGCCC TGTGGACCGC CTCCGCCGGC GTGCGCCTGA TGATGAGCGC CATGAACGCC
GCTTACGATG TGCCCGAAGG GCGCCCGGTG TGGAAGCGTA TCCCGCTTTC CATTTTCTAC
ACCGTGGGCC TGGCTGGCAT GCTGCTGGCG GCCGCAGCGC TGATGGTGCT GGGCCCGCAG
GTGATGGAAT GGATAGCCGC CCAGATCGGC ATGCAGGAGT TCATCGTCAC ACTGTGGACC
ATCCTGCGCT GGCCGGTGAT CATCATTCTG CTGATGGTGG CAGTGGCCCT GATCTATTAC
GTGATGCCTG ATGTGAAACA GCAGTTTCGC TTCATCACCC CGGGCTCGGT GCTGGCGGTT
GTGGTGTGGA TCGTCGCCTC ACTGGGCTTT GCCTACTACG TGAAGACCTT TGCCGACTAC
AACGCCATGT ACGGCAGCAT TGGTGCAATC ATCGTGCTGT TGCTGTATTT CTATATTTCG
GCTGCCGTGC TGCTGCTCGG CGCCGAAATG AATGCGGTGA TCGAGCACAT GTCAGCCGAA
GGCAAGAACC CGGGCGAGAA AGACTTCGAC GGGGAAAAGC CCAAGGAAAC CTTGACTGTA
CTGGGTCACG AGCACCCGAA CCCGAGCAAG CCTCATAGCG TCGAGCCGAA CCCCTGA
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| Protein sequence | MIFPDLRGLP LHRVLVRTVK EFLDDEMSTY ASALAYQALF SLFPFLLFLI ALIGFLHLPD
FFSWLRLQSE LVLPPQALEQ VNPVIDQLQQ SKGGLLSVGI VIALWTASAG VRLMMSAMNA
AYDVPEGRPV WKRIPLSIFY TVGLAGMLLA AAALMVLGPQ VMEWIAAQIG MQEFIVTLWT
ILRWPVIIIL LMVAVALIYY VMPDVKQQFR FITPGSVLAV VVWIVASLGF AYYVKTFADY
NAMYGSIGAI IVLLLYFYIS AAVLLLGAEM NAVIEHMSAE GKNPGEKDFD GEKPKETLTV
LGHEHPNPSK PHSVEPNP
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