Gene Pput_1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1325 
Symbol 
ID5192662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1492960 
End bp1493820 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content62% 
IMG OID640585792 
Producthypothetical protein 
Protein accessionYP_001266669 
Protein GI148546567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.806201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.411891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTAC GCCTGCCCAA AGCCCTGCTT ATCGCCATCG GCTTCGCCCT GGCCTTGGCC 
GCCTGCAGCC GCATCGACCT GGCCTATCGC AACCTCGACC GCCTGGTGCC TTGGTCGCTG
AGCGACTACC TGGACATGAA CCGCGAGCAA AGGGCGCTGC TGGACGATCG GTTGCGCGAG
CACCTGGCCT GGCATTGCAA GACTCAACTG CCCGGCTACC TTGACTGGCT CGACCGGCTA
CGTGAGCTGG TCGCCGACGA CCAGGTCACC GACCAGGCCC TGCAGCAAAG CACCCGCGAG
GTCCGTGAGG CAATTGGTCG GGTGGCCGAG GAAATCACCC CTTCGGCCAC CGAACTGCTG
CGCGGCATGA GCGACGACCA GGTAGCGCAG ATGCGTGAAG CCTTCCGCGA TGACATCAGT
GAGCGGCAAA AGCAGTATGT GGATACGCCA TTGCCGAAGC AGATGGCCCG CCGTAGCGAA
CGCATGGAAA AACGCCTGAC GCCATGGTTT GGCGAGTTGA CGGCGGTACA GAAGCAACGC
ATCCAGACCT GGTCTCAAGC GCTGGGTGAC CAGAACCGTG AATGGATCGC CAACCGTGCC
CACTGGCAAC AGCAACTGCT GTTGGCGATG AACCAGCGCA ACGACTCCAG TTTCGAGCCG
CGCCTGGCGA CCTTGTTGCA ACGCAAGGAG AGTTTGTGGA CACCCGAATA CCGGGCGGCA
TATCAGAATG CCGAGCAGCA GGCACGCAGC CTGCTGGTGG ACCTGGTGCG GCAAAGCACC
CCGCAACAGC GGCGGTTCCT GCAGGAACGG CTGAGCAAGG TGCGTACCCA TTTGAGCGAG
ATGAAGTGTT TGAAGGCGTG A
 
Protein sequence
MPLRLPKALL IAIGFALALA ACSRIDLAYR NLDRLVPWSL SDYLDMNREQ RALLDDRLRE 
HLAWHCKTQL PGYLDWLDRL RELVADDQVT DQALQQSTRE VREAIGRVAE EITPSATELL
RGMSDDQVAQ MREAFRDDIS ERQKQYVDTP LPKQMARRSE RMEKRLTPWF GELTAVQKQR
IQTWSQALGD QNREWIANRA HWQQQLLLAM NQRNDSSFEP RLATLLQRKE SLWTPEYRAA
YQNAEQQARS LLVDLVRQST PQQRRFLQER LSKVRTHLSE MKCLKA