| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1318 |
|---|
| Symbol | |
|---|
| ID | 5191753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1486269 |
|---|
| End bp | 1487243 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640585785 |
|---|
| Product | cysteine synthase A |
|---|
| Protein accession | YP_001266662 |
|---|
| Protein GI | 148546560 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGTA TCTTTGCAGA CAACGCCCAC TCCATCGGTA ACACGCCGCT GGTGCAGATC
AACCGCATCG CCCCGCGCGG CGTGACCATC CTGGCCAAGA TCGAAGGGCG CAACCCCGGG
TACTCGGTCA AATGCCGCAT TGGCGCGAAC ATGGTCTGGG ACGCCGAGAG CAGCGGTAAG
CTCAAACCGG GCATGACCAT CGTCGAGCCC ACCTCGGGCA ACACGGGTAT CGGCCTGGCC
TTCGTCGCCG CCGCCCGCGG CTACAAGCTG ATGCTGACCA TGCCCGCCTC GATGAGCCTG
GAACGCCGCA AGGTACTGAA GGCGCTGGGC GCCGAGCTGG TATTGACCGA TCCGGCCAAG
GGCATGAAGG GCGCCATCGA GAAGGCCAAC GAAATCGTCG CCTCCGACCC GGAGCAGTAC
TTCCTGCCGG GCCAGTTCGA AAACCCGGCC AACCCGGCCA TTCACGAGAA AACCACCGGT
CCTGAGATCT GGAACGACAC GGACGGCGCC ATCGACGTGC TGGTGGCAGG CGTGGGCACT
GGCGGCACCA TCACCGGCGT GTCGCGCTAC ATCAAACATA CCCAGGGCAA GGCCATCCTG
TCGGTGGCAG TGGAGCCCGT GGCATCGCCG CTGATCAGCC AGACCCTGGC CGGCGAAGAA
CTCAAGCCCA GCCCGCACAA AATCCAGGGC ATCGGCGCCG GCTTCGTGCC GAAAAACCTC
GACCTGTCGA TCGTCGACCA AGTGGTGACG GTGACCGACG AAGAGTCCAA GGCCATGGCG
ATTCGCCTGA TGCAGGAAGA GGGCATCCTT TGTGGTATTT CCTGCGGTGC GGCAATGGCG
GCAGCGGTGC GCCTGGCCGA AAAACCGGAA ATGCAGGGTA AGACCATCGT CGTAATCCTG
CCCGATTCGG GCGAGCGATA TTTGTCGAGC ATGCTGTTCA GCGACATGTT CAGCGAGCAG
GAAAACCAGC AGTAA
|
|---|
| Protein sequence | MSRIFADNAH SIGNTPLVQI NRIAPRGVTI LAKIEGRNPG YSVKCRIGAN MVWDAESSGK
LKPGMTIVEP TSGNTGIGLA FVAAARGYKL MLTMPASMSL ERRKVLKALG AELVLTDPAK
GMKGAIEKAN EIVASDPEQY FLPGQFENPA NPAIHEKTTG PEIWNDTDGA IDVLVAGVGT
GGTITGVSRY IKHTQGKAIL SVAVEPVASP LISQTLAGEE LKPSPHKIQG IGAGFVPKNL
DLSIVDQVVT VTDEESKAMA IRLMQEEGIL CGISCGAAMA AAVRLAEKPE MQGKTIVVIL
PDSGERYLSS MLFSDMFSEQ ENQQ
|
|---|
| |