| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1313 |
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| Symbol | |
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| ID | 5194851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1481120 |
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| End bp | 1481806 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640585780 |
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| Product | allophanate hydrolase subunit 1 |
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| Protein accession | YP_001266657 |
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| Protein GI | 148546555 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2049] Allophanate hydrolase subunit 1 |
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| TIGRFAM ID | [TIGR00370] conserved hypothetical protein TIGR00370 |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.837273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGC GAATTGAAGT GGTCGCCATC GATAGCCTGA TGGTCCGCCT GTTCGACCGT
ATCGATGAGG CCAACATGCC ATGGATGCTC GCCGCCAGCC GGCGCTTGAG CGCGGCGTTC
GGCGAGCACC TGCTGGACCT GGTGCCGTCC TACACCACGC TGATGGTGCA GTCTGCCCTG
CCGCCAGGCG AGGCCAGGGC GCGAATCGCT CAGGCGCTGG ACGGCTTGCA GCCTGACACA
GGCAGTGGCG GCCGCCGACA CGAGATCCCG GTGTGGTACG ACGCCAGTGT CGGCCCCGAG
CTGCCTGTGC TGGCGGCCCG CAGCGGCTTG AGTGAAGCGG AGATTGTTCG CTTGCACGGC
GAACGTGATT ACCCGGTGTT TGCCCTGGGC TTCGCGCCTG GTTTCGGCTT CATGGGCCTG
GTCGACGAGC GCCTGGCCAG CCCTCGTCTG AGTACCCCGC GCAAGCGCGT GGCGGCGGGC
AGCGTGGGTA TTGCCGAGCG CCAGACGGCG GCCTACCCGG CAGTATCGCC GGGTGGCTGG
AACCTGATCG GACGCACCCC GGTGCGGTTG TTCGACCGTG AGCGTGAGGG TTACAGCCTT
TTGCAACCCG GTGACCGGGT GCGCTTCGTG CCGGTTTCGC GCAGCGAATT CCTGGCCATG
GGTGGTGATG TGGAGGCGCA GGGATGA
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| Protein sequence | MKPRIEVVAI DSLMVRLFDR IDEANMPWML AASRRLSAAF GEHLLDLVPS YTTLMVQSAL
PPGEARARIA QALDGLQPDT GSGGRRHEIP VWYDASVGPE LPVLAARSGL SEAEIVRLHG
ERDYPVFALG FAPGFGFMGL VDERLASPRL STPRKRVAAG SVGIAERQTA AYPAVSPGGW
NLIGRTPVRL FDREREGYSL LQPGDRVRFV PVSRSEFLAM GGDVEAQG
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