| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1310 |
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| Symbol | |
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| ID | 5193230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1478006 |
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| End bp | 1478917 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585777 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001266654 |
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| Protein GI | 148546552 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000494191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTTC GCTTCCTCGA AACCTTCGTC TGGGTCGCCC GGCTCAAGAG CTTCCGCCTG
ACGGCAGAAA AGCTGTTCAC CACCCAGGCT TCGGTATCCA GCCGTATTGC CGCACTGGAG
GCTGACCTGG GCGTGAAGCT GTTGCTGCGC GACTCCCGCG GCGTCAGCCT GACCCCGGAG
GGCGGCAAGG TACTGGAATA CGCCGAACGC ATGCTGGAAA CCGCCAAGGC CATGAAGCAG
TCGCTGGACA GCGACCGGGC CAAGGTCGGG CGCATTCGCA TCGGGGTAAT GGACACTGTG
ATCCACACCT GGATGAGCGC GCTGGTGGCG GAGCTGACCG AGCGCTACCC GCAGGTGGAA
ATCGAACTGG TGGCCGACAC CGCGCTGAAC TTGCGCGAGC AACTGCAGAA GGGCTTTCTT
GACGTGATTT TGCAGACCGA CTTGCTGCGC GAGCAATCGA TCCGCAGCCT CGACCTGGCG
CGCTACCCAA TGGGCTGGGT GGTGGCCGCA GGCGCCCACC AGCACCGGGA CTATGCGTCG
CTGGCCGAAC TTGGGCGCGA GCGCATCATC ACCTTCTCGA AGAATTCACG GCCGCACCAA
GAGGTGCTGA GCTTGCTGCA GGCTGCGGGG GCAGAGGCGC CGAGGTTGAA TTGTGTGAAT
TCGGTGGCGG CGATTACCCG GCTGTTGCGC GACGGTTTTG GCATTGGCGC GCTACCGCCG
GCGCTGGTGG ATGCCGAGTT GGGCCGGGGC GAGCTGGTGC TGCTGGAAGG GTTGCAGCCG
CCGCCGAGCC TTGAGCTGGT GGTGGCCTGG CAGACCGGGG TGGCATTGGT CGATGAGGTG
GTTGGGGTTT GCCGGCAGGT GTTGGAGCGG TATGCGCGGG ATGTGGGGGG GCAGCGGATC
GTGCTGGTCT GA
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| Protein sequence | MNLRFLETFV WVARLKSFRL TAEKLFTTQA SVSSRIAALE ADLGVKLLLR DSRGVSLTPE
GGKVLEYAER MLETAKAMKQ SLDSDRAKVG RIRIGVMDTV IHTWMSALVA ELTERYPQVE
IELVADTALN LREQLQKGFL DVILQTDLLR EQSIRSLDLA RYPMGWVVAA GAHQHRDYAS
LAELGRERII TFSKNSRPHQ EVLSLLQAAG AEAPRLNCVN SVAAITRLLR DGFGIGALPP
ALVDAELGRG ELVLLEGLQP PPSLELVVAW QTGVALVDEV VGVCRQVLER YARDVGGQRI
VLV
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