Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1308 |
Symbol | |
ID | 5192233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1476566 |
End bp | 1477339 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640585775 |
Product | glutamine amidotransferase, class-II |
Protein accession | YP_001266652 |
Protein GI | 148546550 |
COG category | [R] General function prediction only |
COG ID | [COG0121] Predicted glutamine amidotransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00128669 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGCGAAC TGCTGGGCAT GAGTGCCAAC GTCCCTACCG ACATTGTTTT CAGCTTCACC GGCCTGATGC AGCGGGGCGG GCGTACCGGC CCGCACCGTG ACGGCTGGGG GATAGGCTTT TACGAAGGCC GCGGCCTGCG CCTGTTCCAG GACCCGGCCG CGAGCAGCGA GTCGGAAGTA GCCAACCTCG TGCAGCGCTA CCCGATCAAA AGCGAAGTGG TGATCGGTCA TATCCGTCAG GCCAACGTCG GCAGGGTGTG CCTGTCCAAC ACCCACCCGT TCGTACGGGA AATGTGGGGC CGCAACTGGT GCTTCGCGCA CAATGGCCAG CTGGGTGACT TCAAGGGCCT GGCCAGTTTT TACCGGCCAG TGGGCGACAC TGACAGCGAA GCGGCCTTCT GCGACCTGCT CAACCGCATC CGCAGCGCCT TCCCCGAACC GGTGCCGGTG GAACAGCTGC TGCCCGTGTT GGTCGAAGCC TGTGCCGGCT ACCGTGGTCA GGGCGTGTTC AACTGCATGC TCAGCGACGG CGACTGGCTG TTCTGCTTTT GCTCGACCAA GCTGGTGCAC ATTACCCGCC GTGCGCCATT TGGTGCCGCA CGGTTGAAGG ATGTCGACCT GATCGTCGAT TTTCATACCG AAACCACCCC CAACGACGTG GTCACGGTGA TTGCTACCGA GGCCCTGACC GAGAACGAGA CCTGGCACCG CTACGCGCCG GGTCAGTGGG CCCTGTGGCG GCACGGCGAG TGCGTGGCGC ACGGCCAGAG CTAA
|
Protein sequence | MCELLGMSAN VPTDIVFSFT GLMQRGGRTG PHRDGWGIGF YEGRGLRLFQ DPAASSESEV ANLVQRYPIK SEVVIGHIRQ ANVGRVCLSN THPFVREMWG RNWCFAHNGQ LGDFKGLASF YRPVGDTDSE AAFCDLLNRI RSAFPEPVPV EQLLPVLVEA CAGYRGQGVF NCMLSDGDWL FCFCSTKLVH ITRRAPFGAA RLKDVDLIVD FHTETTPNDV VTVIATEALT ENETWHRYAP GQWALWRHGE CVAHGQS
|
| |