Gene Pput_1308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1308 
Symbol 
ID5192233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1476566 
End bp1477339 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content64% 
IMG OID640585775 
Productglutamine amidotransferase, class-II 
Protein accessionYP_001266652 
Protein GI148546550 
COG category[R] General function prediction only 
COG ID[COG0121] Predicted glutamine amidotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00128669 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGAAC TGCTGGGCAT GAGTGCCAAC GTCCCTACCG ACATTGTTTT CAGCTTCACC 
GGCCTGATGC AGCGGGGCGG GCGTACCGGC CCGCACCGTG ACGGCTGGGG GATAGGCTTT
TACGAAGGCC GCGGCCTGCG CCTGTTCCAG GACCCGGCCG CGAGCAGCGA GTCGGAAGTA
GCCAACCTCG TGCAGCGCTA CCCGATCAAA AGCGAAGTGG TGATCGGTCA TATCCGTCAG
GCCAACGTCG GCAGGGTGTG CCTGTCCAAC ACCCACCCGT TCGTACGGGA AATGTGGGGC
CGCAACTGGT GCTTCGCGCA CAATGGCCAG CTGGGTGACT TCAAGGGCCT GGCCAGTTTT
TACCGGCCAG TGGGCGACAC TGACAGCGAA GCGGCCTTCT GCGACCTGCT CAACCGCATC
CGCAGCGCCT TCCCCGAACC GGTGCCGGTG GAACAGCTGC TGCCCGTGTT GGTCGAAGCC
TGTGCCGGCT ACCGTGGTCA GGGCGTGTTC AACTGCATGC TCAGCGACGG CGACTGGCTG
TTCTGCTTTT GCTCGACCAA GCTGGTGCAC ATTACCCGCC GTGCGCCATT TGGTGCCGCA
CGGTTGAAGG ATGTCGACCT GATCGTCGAT TTTCATACCG AAACCACCCC CAACGACGTG
GTCACGGTGA TTGCTACCGA GGCCCTGACC GAGAACGAGA CCTGGCACCG CTACGCGCCG
GGTCAGTGGG CCCTGTGGCG GCACGGCGAG TGCGTGGCGC ACGGCCAGAG CTAA
 
Protein sequence
MCELLGMSAN VPTDIVFSFT GLMQRGGRTG PHRDGWGIGF YEGRGLRLFQ DPAASSESEV 
ANLVQRYPIK SEVVIGHIRQ ANVGRVCLSN THPFVREMWG RNWCFAHNGQ LGDFKGLASF
YRPVGDTDSE AAFCDLLNRI RSAFPEPVPV EQLLPVLVEA CAGYRGQGVF NCMLSDGDWL
FCFCSTKLVH ITRRAPFGAA RLKDVDLIVD FHTETTPNDV VTVIATEALT ENETWHRYAP
GQWALWRHGE CVAHGQS