| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1304 |
|---|
| Symbol | |
|---|
| ID | 5194644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 1472311 |
|---|
| End bp | 1472781 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640585771 |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | YP_001266648 |
|---|
| Protein GI | 148546546 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAACA AACGATACAG CTGCATCGGC CTGTTCAACC CCAAGTCGGC AGAAAACGTC
GGCTCTGTGA TGCGCGCAGC GGGCTGCTAT GGCGTCAATT CGGTGTTCTA CACGGGCAAA
CGCTATGAAC GCGCACGTGA CTTCGTCACT GACACCAAGC GCGTGCACTA CGACATCCCG
CTGATCGGCA TCGACGACCT GCAGCGCATT ATCCCGCTGG GCTGCACGCC AGTAGCGGTA
GAACTGGTGG AGGGTGCGCG GCCATTGCCG GATTACACCC ATCCGGACCG GGCCATTTAC
ATCTTCGGGC CAGAGGATGG CTCGTTGAGC GAAGAGGTGC GGGGATGGTG TGAAGAGACT
ATCTACATCC CGACCGAGGG CTGCATGAAC CTGGCAGCGA CGGTGAATGT GGTGCTGTAC
GACCGCTTGG CCAAGGGGCT GAATACCCGC TCGGGGCCCA AGTTCAAATA A
|
|---|
| Protein sequence | MANKRYSCIG LFNPKSAENV GSVMRAAGCY GVNSVFYTGK RYERARDFVT DTKRVHYDIP
LIGIDDLQRI IPLGCTPVAV ELVEGARPLP DYTHPDRAIY IFGPEDGSLS EEVRGWCEET
IYIPTEGCMN LAATVNVVLY DRLAKGLNTR SGPKFK
|
|---|
| |