Gene Pput_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1280 
Symbol 
ID5190972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1447340 
End bp1447675 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content60% 
IMG OID640585748 
ProductArsR family transcriptional regulator 
Protein accessionYP_001266625 
Protein GI148546523 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.775463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTA ATGAAACCCC CGTTATCATG TCAACCATGC GAGCCTATAA ACATCCCAAC 
CCCGACGACC TCATTCTTGA ACGCCTGCTC TATGCGCTCA GCGACCCCGT GCGCCTGGAA
ATCGTCCGCC ACCTGGCCGG CGTGGCCGAG GCCAGCTGTG GCGAGCTGGA TGGAGGTCGG
CCGAAGTCGA GCATGTCCCA CCACTTCCGT GTGTTGCGTG ATGCAGGGCT GGTGCAAACC
CGCAATGTGG GGACTACCCA TATGAATTCG CTGCGTAGCG AGATGCTGGG CGAGCGGTTT
CCCGGGCTGC TGGAGTGCAT CCTGCGCCAG CAGTGA
 
Protein sequence
MAINETPVIM STMRAYKHPN PDDLILERLL YALSDPVRLE IVRHLAGVAE ASCGELDGGR 
PKSSMSHHFR VLRDAGLVQT RNVGTTHMNS LRSEMLGERF PGLLECILRQ Q