| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1279 |
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| Symbol | |
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| ID | 5191421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1445570 |
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| End bp | 1447207 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585747 |
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| Product | malate:quinone oxidoreductase |
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| Protein accession | YP_001266624 |
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| Protein GI | 148546522 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0579] Predicted dehydrogenase |
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| TIGRFAM ID | [TIGR01320] malate:quinone-oxidoreductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.733781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGA AAGCTGGCAA GACCTTGCTG GGTCTGGCGG TCGCTGCAAG CGTCATGCAA
GCGCACGCTG CAGAAACCAA GAAAGTAGAT GTGCTGCTGG TCGGCGGCGG CATCATGAGC
TCCACCCTGG CCGTGTGGCT GCACGAGCTG GAGCCAAGCT GGTCGATGGA AATGGTCGAG
CGCCTGGATG GCGTGGCCGA AGAAAGCTCC AACGGCTGGA ACAACGCCGG TACCGGCCAC
TCCGCGCTGG CCGAGCTGAA TTACACCCCG GAAGACAAAG ACGGCAACGT CAACATCTCC
AAGGCCATCG AAATCAACGA AGCCTTCCAG ATTTCCCGCC AGTTCTGGTC GTGGCAAGTA
CGCCAGGGCG TGCTGAAGAA CCCGCACTCG TTCATCAACA CCACCCCGCA CATGAGCTTC
GTGTGGGGCG ATGACAACAT CAAGTTCCTC AAGAAACGCT ACGACGCACT GCAGGCTAGC
CCGCTGTTCC GTCCGATGCA GTACTCCGAG GACCACGCGC AGATCGCCAA GTGGGTCCCG
CTGATGATGG AGGGCCGCGA CCCGAACCAG AAGCTGGCCG TGACCTGGAC GCCAATCGGC
ACCGACGTGA ACTTTGGCGA GATCACCCGC CAGTTCGTTG GCCACCTGCA GACCCAGAAA
GGCTTCGACC TGAAGCTGTC CAGCGAAGTG CAGGACATCA CCCGCAACAA GGACGGCTCC
TGGCACGTCG AGTACAAGAA CCTGAAGGAC GGTACCGAGT CGGCCACCGA CGCCAAGTTC
CTGTTCATCG GTGCCGGCGG CGGCGCGCTG AAGCTGCTGC AGAAGTCGGG TATTCCGGAA
GCCAAGGAAT ACGCAGGCTT CCCGGTGGGT GGCTCGTTCC TGGTGACCGA GAACCCGACC
GTGGCCATGC AGCACATGGC CAAGGCCTAC GGCATTGCTT CGACCGGTGC GCCACCCATG
TCGGTCCCAC ACCTGGACAC CCGCGTGCTG GACGGCAAGC GCGTCATCCT GTTTGGCCCG
TTCGCTACCT TCTCGACCAA GTTCCTGAAG AACGGTTCTT ACCTGGACCT GCTGAGCAGC
ACCACCACCC ACAACGTGTG GCCGATGACC AAGGTGGGTA TCGACCAGTA TCCGCTGGTC
GAGTACCTCG CTGGCCAGCT GATGCTGTCT GACGATGACC GCTTCGAAGC CCTGCGCACC
TACTTCCCGA ATGCCAAGAA GGAAGACTGG CGCCTGTGGC AGGCCGGCCA GCGTGTGCAG
ATCATCAAGC GTGATGCCGA CAAGGGCGGC GTGCTGAAGC TGGGTACTGA AGTGGTGGCT
TCCGAAGACC GCACCATCGC GGGTCTGCTG GGTGCCTCGC CAGGTGCTTC GACCGCTGCG
CCGATCATGC TGAACGTGCT GGAAACCGTG TTCAAGGACA AGGTCGCTAC CCCGGAGTGG
CAGGCCAAGA TCAAGGAAAT CGTGCCGAGC TACGGCACCA AGCTGAACGA TTCGGCAGCG
GCCACCCAGA AAGAGTGGAA CTACACCGCT GAAGTGCTGC AACTGGGTAA ACCGCCGGTG
ATCGACGCCA GCGTTGAATT CGGTGGCGCG GCAAGCAAGC CGGTTGAGAG CAAGCCTGAG
AACGACATGG CGCTGTAA
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| Protein sequence | MFKKAGKTLL GLAVAASVMQ AHAAETKKVD VLLVGGGIMS STLAVWLHEL EPSWSMEMVE
RLDGVAEESS NGWNNAGTGH SALAELNYTP EDKDGNVNIS KAIEINEAFQ ISRQFWSWQV
RQGVLKNPHS FINTTPHMSF VWGDDNIKFL KKRYDALQAS PLFRPMQYSE DHAQIAKWVP
LMMEGRDPNQ KLAVTWTPIG TDVNFGEITR QFVGHLQTQK GFDLKLSSEV QDITRNKDGS
WHVEYKNLKD GTESATDAKF LFIGAGGGAL KLLQKSGIPE AKEYAGFPVG GSFLVTENPT
VAMQHMAKAY GIASTGAPPM SVPHLDTRVL DGKRVILFGP FATFSTKFLK NGSYLDLLSS
TTTHNVWPMT KVGIDQYPLV EYLAGQLMLS DDDRFEALRT YFPNAKKEDW RLWQAGQRVQ
IIKRDADKGG VLKLGTEVVA SEDRTIAGLL GASPGASTAA PIMLNVLETV FKDKVATPEW
QAKIKEIVPS YGTKLNDSAA ATQKEWNYTA EVLQLGKPPV IDASVEFGGA ASKPVESKPE
NDMAL
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