Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1271 |
Symbol | |
ID | 5192285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1437876 |
End bp | 1438226 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640585739 |
Product | putative transcriptional regulator |
Protein accession | YP_001266616 |
Protein GI | 148546514 |
COG category | [K] Transcription |
COG ID | [COG3636] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR02684] probable addiction module antidote protein |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.357331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.666543 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAGCA AAAAAATTTC GCCGCAAGAC ATGCCAATCC TTGATCTGGA TTTGAGCAAA ACAAAACGCT TCGAGGCCTC CCGGTTTCTC GACAGCCCGG AAACCATCGC GGCATTTCTG GCAGAAGCAA TGAAGGCTAA TGACGCTCAG ACCCTGATGC ATGCATTGGG TGAAGTGGCA AAAGCCAAGG GCGTGAATCA GTTTGCGCAA GACGCAGGGG TCAATCGAGA GTCTCTTTAT AAAACGCTGA AGGGCGGAGA AAAGACCCGT TTCACTACTA TTCAAAAACT GATGGTTGCC TTAGGCGTAG AGCTCACAGT CAGGCCGCTC GAGAAGCTTC CGGGCTCTTG A
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Protein sequence | MMSKKISPQD MPILDLDLSK TKRFEASRFL DSPETIAAFL AEAMKANDAQ TLMHALGEVA KAKGVNQFAQ DAGVNRESLY KTLKGGEKTR FTTIQKLMVA LGVELTVRPL EKLPGS
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