Gene Pput_1271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1271 
Symbol 
ID5192285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1437876 
End bp1438226 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content50% 
IMG OID640585739 
Productputative transcriptional regulator 
Protein accessionYP_001266616 
Protein GI148546514 
COG category[K] Transcription 
COG ID[COG3636] Predicted transcriptional regulator 
TIGRFAM ID[TIGR02684] probable addiction module antidote protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.357331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.666543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGCA AAAAAATTTC GCCGCAAGAC ATGCCAATCC TTGATCTGGA TTTGAGCAAA 
ACAAAACGCT TCGAGGCCTC CCGGTTTCTC GACAGCCCGG AAACCATCGC GGCATTTCTG
GCAGAAGCAA TGAAGGCTAA TGACGCTCAG ACCCTGATGC ATGCATTGGG TGAAGTGGCA
AAAGCCAAGG GCGTGAATCA GTTTGCGCAA GACGCAGGGG TCAATCGAGA GTCTCTTTAT
AAAACGCTGA AGGGCGGAGA AAAGACCCGT TTCACTACTA TTCAAAAACT GATGGTTGCC
TTAGGCGTAG AGCTCACAGT CAGGCCGCTC GAGAAGCTTC CGGGCTCTTG A
 
Protein sequence
MMSKKISPQD MPILDLDLSK TKRFEASRFL DSPETIAAFL AEAMKANDAQ TLMHALGEVA 
KAKGVNQFAQ DAGVNRESLY KTLKGGEKTR FTTIQKLMVA LGVELTVRPL EKLPGS