Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1254 |
Symbol | |
ID | 5192011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1418830 |
End bp | 1419477 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640585720 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001266599 |
Protein GI | 148546497 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0602] Organic radical activating enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.04187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGACA CATTACGCAT CACCGAAGTC TTTTACTCTT TGCAGGGTGA GACGCGAACG GCCGGGCTGC CTACGGTATT TGTGCGCCTC ACCGGTTGCC CCCTGCGTTG CCAGTACTGC GACAGTGCCT ATGCCTTCAG TGGCGGTACC GTTCGCACCC TTGATTCGAT CCTTGAGCAA GTGGCCGGCT TCAAGCCGCG CTACGTGTGT GTCACCGGTG GCGAACCGCT GGCCCAGCCC AACGCCTTGC CGTTGCTGCA GCGGCTGTGT GATGCCGGTT ACGAGGTGTC GCTGGAAACC AGCGGCGCGC TGGATATTGC CGGCACCGAC ACCCGCGTCA GCCGTGTGGT CGACCTGAAA ACCCCAGGCT CCGAAGAGTC GCACCGTAAC CGCTACGAGA ACATCGAGCA GCTGACGCGC AACGACCAGG TCAAGTTCGT CATTTGTTCC CGTGAGGATT ATGACTGGGC GGTATCCAAG CTGATCCAGT ACAACCTGGC AGAGCGTGCC GGTGAGGTGT TGTTCTCACC CAGCCATCAT CAGGTGAACG CCAGTGACCT GGCTGACTGG ATCGTTGCTG ACAACCTGCC CGTACGCTTC CAACTTCAGC TGCACAAGCT GCTGTGGAAC GACGAGCCCG GACGTTGA
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Protein sequence | MQDTLRITEV FYSLQGETRT AGLPTVFVRL TGCPLRCQYC DSAYAFSGGT VRTLDSILEQ VAGFKPRYVC VTGGEPLAQP NALPLLQRLC DAGYEVSLET SGALDIAGTD TRVSRVVDLK TPGSEESHRN RYENIEQLTR NDQVKFVICS REDYDWAVSK LIQYNLAERA GEVLFSPSHH QVNASDLADW IVADNLPVRF QLQLHKLLWN DEPGR
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