| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1253 |
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| Symbol | |
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| ID | 5192010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1417855 |
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| End bp | 1418661 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585719 |
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| Product | Tol-Pal system, YbgF |
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| Protein accession | YP_001266598 |
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| Protein GI | 148546496 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0226612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATGT GCCGCCGTGT AGTAACCGTC CTCGCACTCA GCCTGCCGCT TGCGGCTTGG
GCTGAGGTCC CTGTAGTAGA TGACAACGCA GGCAGCTATC CGCCTGCGGG TTATGGCACG
AGCGGCGCCT ATGCCGGGTC AGGGGCTTCG GCCCCTGCCT CTGCACAGGG CCAGCTGTTC
ATGCAGCTGC AACAGATGCA GGATCAGCTT TCCCGCCAGC AAGGCATCAT CGAAGAGCTG
CAAAACGATG TGTCGCGCAT GAAGCAGGAA AACCTGGAGC GTTACCAGGA CCTGGACCGT
CGCATCAACA GTGGCGCTGC GCCTGCCGCA ACCCCTGACA ATTCCTCCGG TGGTGGTGCG
TCCAATGCCG CCCCCGATGC CGCAGCAGGT GCTGCTGCGC AACAACCGGC CGGCAGTAGC
CAGCCCGGTG ATCCGGCGAA AGAGAAGCTC TATTACGACG CAGCTTTCGA CCTGATCAAA
CAGAAAGACT TCGACAAGGC CAGCCAGGCG TTCAGCGCCT TCCTGCGCAA GTACCCCAAC
AGCCAGTACG CCGGTAATGC CCAGTACTGG TTGGGTGAAG TGAACCTGGC CAAGGGTGAC
CTGCAAGGCG CCAGCCAGGC TTTTGCCCAG GTCAGCCAAA AGTACCCGAA GCACAGCAAG
GTGCCAGATT CGCTGTACAA ACTGGCTGAT GTCGAGCGCC GTATGGGCCA TACCGACAAG
GTAAAAGGCA TCCTCCAGCA GGTTGTCACC CAGTACCCCG GCACCTCTGC CGCTCAACTG
GCTCAGCGTG ACCTGCAGAA GCTCTAG
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| Protein sequence | MRMCRRVVTV LALSLPLAAW AEVPVVDDNA GSYPPAGYGT SGAYAGSGAS APASAQGQLF
MQLQQMQDQL SRQQGIIEEL QNDVSRMKQE NLERYQDLDR RINSGAAPAA TPDNSSGGGA
SNAAPDAAAG AAAQQPAGSS QPGDPAKEKL YYDAAFDLIK QKDFDKASQA FSAFLRKYPN
SQYAGNAQYW LGEVNLAKGD LQGASQAFAQ VSQKYPKHSK VPDSLYKLAD VERRMGHTDK
VKGILQQVVT QYPGTSAAQL AQRDLQKL
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