| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1251 |
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| Symbol | tolB |
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| ID | 5195525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1416022 |
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| End bp | 1417293 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585717 |
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| Product | translocation protein TolB |
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| Protein accession | YP_001266596 |
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| Protein GI | 148546494 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0936092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCTGCT GCGTGGCAGG CATGGCGGTG GCAGAAGAAA AGAACATCCT GGTTACCAGC
GGCAGCGACC GGGCCACGCC CATCGCGGTA GTACCGTTCG GTCTGCAGGG CGGCAGCGTG
CTGCCCGAAG ACATCGCCGA CATCATTGGC AATGACCTGC GCAACTCTGG CTACTACTCG
CCAATTCCGC GGCAGAACAT GATCAGCCAG CCGTCGCAGG CCAGCGAAGT GATCTTCCGT
GATTGGAAAG CGCTGGGTGC ACAGTACGTG ATGGTCGGCA GCATTGTGCC GTCGGGCGGT
CGCCTGCAGG TGCAGTACGC GCTGTTCAAC GTCGCCACCG AGCAGCAAGT GCTGACCGGC
AGCGTGGCGG GCAGCACCGA CCAGCTGCGC GACATGGCGC ACTACATTGC CGACCAGTCG
TTCGAGAAGC TCACCGGCAT CAAGGGCGCG TTCTCTACGC GCATGCTGTA CGTGACGGCC
GAGCGTTTCT CCACCAACAA CACCCGCTAC ACCCTCCAGC GTTCGGACTA CGACGGTGCG
CGTGCGGTGA CCCTGCTGCA ATCGCGTGAG CCGATCCTGT CGCCGCGCTT TGCGCCAGAT
GGCAAACGTA TCGCCTACGT TTCGTTCGAG CAGAAGCGCC CACGTATCTT CGTGCAGAAC
ATCGATACTG GCCGCCGCGA GCAGGTGACC AACTTCGAAG GCCTGAACGG TGCGCCAGCC
TGGTCGCCGG ACGGTTCGCG CCTGGCGTTC GTGCTGTCCA AGGACGGCAA CCCGGACATC
TACGTGATGA ACGTGGCCTC GCGCCAGATC AGCCGTGTTA CTGCAGGCCC GGGTATCAAT
ACCGAGCCGT TCTGGGGTAA AGATGGCAAC ACCCTCTACT TCACTTCCGA CCGTGGCGGC
AAACCGCAGA TCTATAAACA GTCGGTCAGT GGTGGTGGTG CCGAGCGCGT AACGTTCGTG
GGTAACTACA ACGCCAACCC GAAACTTTCG GCGGACGAAA AGACCCTGGT AATGATCCAT
CGCCAACAGG GCTTTACCAA CTTCAAAGTG GCGGCACAGG ACTTGCAGCG CGGAAGTGTA
AAGATTCTGT CTGAAACAAG TCTTGATGAG TCTCCCACTG TTGCGCCAAA CGGCACCATG
CTAATCTACG CCACCCGCCA GCAGGGCCGG GGAGTCTTGA TGCTCGTGTC GCTGAACGGC
CGCGTGAGGC TCCCACTTCC TACCGCTCAA GGCGAAGTCA GAGAACCGTC CTGGTCCCCT
TACCTGAACT GA
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| Protein sequence | MLCCVAGMAV AEEKNILVTS GSDRATPIAV VPFGLQGGSV LPEDIADIIG NDLRNSGYYS
PIPRQNMISQ PSQASEVIFR DWKALGAQYV MVGSIVPSGG RLQVQYALFN VATEQQVLTG
SVAGSTDQLR DMAHYIADQS FEKLTGIKGA FSTRMLYVTA ERFSTNNTRY TLQRSDYDGA
RAVTLLQSRE PILSPRFAPD GKRIAYVSFE QKRPRIFVQN IDTGRREQVT NFEGLNGAPA
WSPDGSRLAF VLSKDGNPDI YVMNVASRQI SRVTAGPGIN TEPFWGKDGN TLYFTSDRGG
KPQIYKQSVS GGGAERVTFV GNYNANPKLS ADEKTLVMIH RQQGFTNFKV AAQDLQRGSV
KILSETSLDE SPTVAPNGTM LIYATRQQGR GVLMLVSLNG RVRLPLPTAQ GEVREPSWSP
YLN
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