Gene Pput_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1247 
Symbol 
ID5193686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1413260 
End bp1413712 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content60% 
IMG OID640585713 
ProductPol-Pal system-associated acyl-CoA thioesterase 
Protein accessionYP_001266592 
Protein GI148546490 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.305337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCGC AAAATCAGCT CGAACCGTTC GCACACCGGT GTCGCGTCTA TTACGAAGAT 
ACCGATGCGG GCGGCGTGGT GTATTACGTC AACTACCTGA AATTCATGGA GCGCGCGCGC
ACCGAACGCC TGCGGCACCT GGGCTTTTCC CAGTCGCAGC TGGCTGAAGA CAACCTGCTG
TTCGTGGTCC ATTCCAGCGA AGCGCGCTAT CACGCGCCGG CGCGGCTGGA TGACGAATTG
CGGGTGACCG CGCAAGTACT TGAACTCAAT CGCGCCAGCT TGCGTTTCGT ACAGCAGGTC
TGGCGGGAAA AGGATGAAAC GCTGCTTTGC GAAGGGCAGT TCCTGGTGGC TGCCGTGCGC
GCCGACACTT TCAAACCCCG AGCCCTACCC CCCCAGCTGC GCGACGCCTT TGCGGCGGAC
GGCTCGGGTA ATCAATCGAA TGCAGGAGAA TAA
 
Protein sequence
MRAQNQLEPF AHRCRVYYED TDAGGVVYYV NYLKFMERAR TERLRHLGFS QSQLAEDNLL 
FVVHSSEARY HAPARLDDEL RVTAQVLELN RASLRFVQQV WREKDETLLC EGQFLVAAVR
ADTFKPRALP PQLRDAFAAD GSGNQSNAGE