| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1243 |
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| Symbol | |
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| ID | 5194973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1409908 |
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| End bp | 1410654 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640585709 |
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| Product | hypothetical protein |
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| Protein accession | YP_001266588 |
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| Protein GI | 148546486 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.362221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGGTC ATTCCAAGTG GGCGAACATC AAGCACCGCA AAGAGCGCCA GGATGCCAAG
AGGGGCAAGG TCTTCACCAA GTGGATCCGC GAACTGACGG TCGCTGCCAA GCAGGGTGGC
CCTGATCCGG CATCCAACCC GCGCCTTCGC CTGGCGCTGG ACAAGGCGTT GGGCGCCAAC
ATGAGCCGCG ACATCATCGA TCGTGCCGTG GCCCGTGGTG CTGGCACCAA TGAAAGCGAC
AATGTTGAAG AGCTTAGCTA CGAAGGTTAC GGCCCGGGTG GCGTGGCGAT CATGGTCGAA
GCCATGACCG ACAACCGCAA CCGTACCGCC GCGGCCGTGC GCCATGCCTT CACCAAGTGT
GGCGGCAACC TGGGTACTGA CGGTTCTGTG GCCTACCTGT TCGAGCGCAA AGGCCAGATC
AGCTTTGCTC CGGGCGTGGA AGAGGACGCG TTGATGGAAG CGGCAATGGA AGCCGATGCC
GATGACGTGG TCGCCAACGA CGACGGCTCC TTCGACGTGT TCACCTCGTT CAACAGCTTC
TATGCCGTGC GTAATGCCTT GGAAGAGGCT GGCTTCAAGG CCGCTGACGC GGAAATCGTC
ATGCAGCCGA CCACCAGCGC CGAACTCGAC CAGGACGGTG CCGAAAAGGT GCTCAAGCTG
ATCGACATGC TCGAAGACCT GGATGACGTG CAGAACGTTT ACTCCAACGC CCAGATTTCC
GATGAGATCA TGGAAAACCT CGGCTAA
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| Protein sequence | MAGHSKWANI KHRKERQDAK RGKVFTKWIR ELTVAAKQGG PDPASNPRLR LALDKALGAN
MSRDIIDRAV ARGAGTNESD NVEELSYEGY GPGGVAIMVE AMTDNRNRTA AAVRHAFTKC
GGNLGTDGSV AYLFERKGQI SFAPGVEEDA LMEAAMEADA DDVVANDDGS FDVFTSFNSF
YAVRNALEEA GFKAADAEIV MQPTTSAELD QDGAEKVLKL IDMLEDLDDV QNVYSNAQIS
DEIMENLG
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