Gene Pput_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1231 
Symbol 
ID5195244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1395280 
End bp1397922 
Gene Length2643 bp 
Protein Length880 aa 
Translation table11 
GC content65% 
IMG OID640585694 
Producthypothetical protein 
Protein accessionYP_001266576 
Protein GI148546474 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein
[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0755535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCGC ACAATCCCGA ACCTCCGGTG CCACTCGCTA CGGCGCTACC CGGTGCTGTG 
CAGCGCCTGC CCCTACTCGA ACGCCTGAGT CGCTACCGCC AGCCCATAGG CCTGATGGTG
ACCCTGTTAC TGTTCACGAT GGCCTTGATT GCCTGCCGCC ACCTGCTGAG CGAACTGGAC
ATCTATGCCT TGCACGATGC CATGCTCAGC GTGCCCACCC AGTCATTGCT GGGCGCCTTG
CTGGCAACGG TGATCGGCTT TGTGATCCTG CTGGGCTACG AGTGGTCGGC CAGCCGCTAT
GCGGGCGTGA AACTGCCAGC ACGCAGCCTG GCACTGGGCG GCTTCAGCGC CTTTGCCATC
GGCAACGCCA TCGGCCTGTC GATGCTCTCT GGCGGCTCGG TTCGCTATCG CCTGTACGCA
CGGCAAGGGC TTGGTGCTGG CGAAGTCGCA CGCATGACCG TGTTTGCCAG CCTGTCACTG
GGCTGCGCGC TGCCGCCCCT GGCCGCCTTG GCGACATTGA GCAACCTGCC GGCGGCCTCG
ACAGCGCTCG GGTTGGCGCC CGGCCTGCTG GCAGCTGTTG CCAGCGCCGT GCTGGTGGTG
TCTGCCTTAC TGGTAATTGG CTTGTACCGC CGACGCCTGG CCGAGCAACC GGCGGCCAAT
AACCTGCTCG TTCAACTGGG GCGGCGCACA CTTCGCCTGC CGGATGCACG CCTGGCGGCC
CTGCAATTGC TGATAACCGC GCTGGATGTG GCGGCGGCGG CCACCGTGCT CTACCTGTTG
CTGCCCGAAG CCCCTCCTTT CGGCGCGTTC GTGCTGGTGT ACCTGCTGGC CTTGGCCGCG
GGCGTGCTCA GCCACGTACC GGGCGGCGTC GGGGTGTTCG AAGCGATCCT GCTGGCGGCC
TTTGCCGACC AGCTCGGTGC CGCACCGCTG GCGGCTGCCT TGCTGCTGTA CCGGCTGATC
TATGTGGTGC TGCCACTGCT GCTGGCCTGC GTGTTGCTGC TGGCCAATGA AGCCCGACGC
CTGCTGTTTG CGCAACAGGC CATCAAGGCC GCTTCAGGTC TGGCCGCACC GATCCTGTCG
ATTCTGGTGT TCCTGTCCGG CGTGGTGCTG CTTTTTTCCG GTGCCACGCC CGAGATAGAT
ACGCGCCTGG AGCATATGGG TTTCCTGGTG CCACACCGGC TGATCGACGC CTCTCATTTC
GGCGCCAGCC TGATCGGTGT GCTATGCCTG CTGCTGGCCC AAGGCCTGCG CCGGCGCCTG
TCCGCCGCCT GGCTACTGAC CACCGTGCTG TTGCTGGTCG GCGCCCTGCT GTCGCTGTTG
AAGGGCTTTG ACTGGGAAGA GGCTTGCCTG CTGACCTTTA CCGCCGCCCT GCTCGCGCTG
TTCCGCCGCT CGTTCTATCG CCCCAGCCGA CTGCTGGAGC TGCCCTTCTC GCCGGTTTTC
CTGGTGGCCA GCGCCTGTAC GGTGGGCGCA TCAGTGTGGC TTCTGCTGTT CGCCTACCAG
GATGTGCCTT ACAGCCATCA GCTGTGGTGG CAGTTCACCC TCGATGCCGA CGCGCCACGG
GGCCTGCGCG CCGCCATGGG CAGTGCCTTG CTGCTGGCTG CCGTGGCACT GACGTGGCTG
CTGCGCACAG CGCCGCCAGT GATCCACCTG CCCGATGAAG AAGAGCTGCA ACGCGCCAGC
CGCATCCTGC AGGCCTCCGA CCAGCCCGAC GGCGGCTTGG CGCTGACTGG CGACAAGGCG
TTGCTGTTCC ACCCGCGTGG TAACGCGTTC CTCATGTACG CCCGGCGCGG CCGCAGCCTG
GTGGCGCTGT ACGACCCGAT AGGCCCGGCC CAGGAACGCG CCGAGATGAT CTGGCAGTTC
CGCGACCTGT GCGACCTGCA CCACGCACGC CCCGTGTTCT ACCAGGTACG CGCGGAGAAC
CTGCCGTTCT ACATGGACAT CGGCCTGACC GCATTGAAGC TCGGTGAAGA AGCCCGGGTC
GACTTGCGCC GCTTTGACCT TGAAGCCAAA GGCAAGGAGA TGAAAGACCT GCGCTACACC
TGGAACCGCG GCGGACGCGA TGGCCTGAGC CTGGAGATCC ATGAGCCCGG CCACGCCCCG
TTGGCTGAGC TGAATGAAAT TTCCGACGCC TGGCTCGGCG GTAAAAACGT GCGCGAGAAA
GGCTTCTCGC TGGGGCGCTT CAGCCCAGAC TACCTGCAGC ACTTCCGCAT AGCCCTGATT
CGCTTCCAGG GCCGCCCGGT AGCCTTCGCC AACTTGCTGG AAACCCATGG AAACGAGCTG
GCCAGCCTCG ACCTGATGCG TGCGCACCCC GAAGCGCCAA AGCTGACCAT GGAGTTCATG
ATGATCGGCT TGATCCTGCA CTACAAAAGC CATGACTACG GGCGTTTCAG CCTGGGCATG
GTACCGCTGT CCGGCCTGCA ACCCAGGCGC GGCGCCCCCT TGACCCAGCG CTTGGGTTCG
CTGGTGTTCC GCCGTGGTGA ACAGCTTTAC AACTTCCAGG GGCTTCGACG CTTCAAGGAC
AAGTTCCAGC CGGACTGGGA ACCCCGCTAC ATGGCCGTGC CAGCCGGGCT CGACCCGCTG
GTGGCACTGG CCGACACCGC CGCTCTGATT GCAGGCGGCC TGACTGGATT GGTGAAACGC
TGA
 
Protein sequence
MTSHNPEPPV PLATALPGAV QRLPLLERLS RYRQPIGLMV TLLLFTMALI ACRHLLSELD 
IYALHDAMLS VPTQSLLGAL LATVIGFVIL LGYEWSASRY AGVKLPARSL ALGGFSAFAI
GNAIGLSMLS GGSVRYRLYA RQGLGAGEVA RMTVFASLSL GCALPPLAAL ATLSNLPAAS
TALGLAPGLL AAVASAVLVV SALLVIGLYR RRLAEQPAAN NLLVQLGRRT LRLPDARLAA
LQLLITALDV AAAATVLYLL LPEAPPFGAF VLVYLLALAA GVLSHVPGGV GVFEAILLAA
FADQLGAAPL AAALLLYRLI YVVLPLLLAC VLLLANEARR LLFAQQAIKA ASGLAAPILS
ILVFLSGVVL LFSGATPEID TRLEHMGFLV PHRLIDASHF GASLIGVLCL LLAQGLRRRL
SAAWLLTTVL LLVGALLSLL KGFDWEEACL LTFTAALLAL FRRSFYRPSR LLELPFSPVF
LVASACTVGA SVWLLLFAYQ DVPYSHQLWW QFTLDADAPR GLRAAMGSAL LLAAVALTWL
LRTAPPVIHL PDEEELQRAS RILQASDQPD GGLALTGDKA LLFHPRGNAF LMYARRGRSL
VALYDPIGPA QERAEMIWQF RDLCDLHHAR PVFYQVRAEN LPFYMDIGLT ALKLGEEARV
DLRRFDLEAK GKEMKDLRYT WNRGGRDGLS LEIHEPGHAP LAELNEISDA WLGGKNVREK
GFSLGRFSPD YLQHFRIALI RFQGRPVAFA NLLETHGNEL ASLDLMRAHP EAPKLTMEFM
MIGLILHYKS HDYGRFSLGM VPLSGLQPRR GAPLTQRLGS LVFRRGEQLY NFQGLRRFKD
KFQPDWEPRY MAVPAGLDPL VALADTAALI AGGLTGLVKR