Gene Pput_1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1226 
Symbol 
ID5194124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1387868 
End bp1389586 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content63% 
IMG OID640585689 
Producthypothetical protein 
Protein accessionYP_001266571 
Protein GI148546469 
COG category[N] Cell motility 
COG ID[COG3351] Putative archaeal flagellar protein D/E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.342125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTTC CTGTGCGCTA CCTCAGTGCT GTCATGTTTG CCCTGGTTTT CGGGTGGAAC 
CTGATGGCCC CGGCCGAGGT GGCCGCAGCG CCGGTGTGTG TCAGTCGTGA CGAGATGGGT
ATGGCCGGTG CCGCAGGCCA GCAGTTCCCC GGTGGCATAG GCGGCACCGG TGTGCGCAAT
GAAAATGGCG GCGTCGGTGG CACCGGTGCC CCAGTCCAGC AACGCCCGGG TGGTACAGGC
GGCACAGGCG CGGTGGCGGA GGGTGTGGAC GGCACCTACT TTGATCAGCG CCACGGGGGG
GGAGGTGGTA CCGGTACGCC GATCCTGCGC CCGGGTGGTA CTGGGGGTAC AGGCATCGTC
GGTACCATCA CCGGCTTCGC CTCGATCTGC GTCAATGGCA TGGAAGTGCA CTATGGCAAG
GACGTACCGG TGAGTGAAAA CGGTGCGCCT GCCAGCAGTG GTCACCTGGC GATCGGGCAG
GTGGTGGCGG TGGAGGCATT CGCCACCCAG CGCGGCCTGC AAGCGGGGCG CATTTCGATC
CTCAACGTCT TCGAAGGGCC GTTGACGGCG CTGCCCAATG CCTCGGCCCC GCTGCGGGTC
ATGGGGCAAC CCGTGCGGCT GGCCGCTGGC GCGCGGGTAG CTGAAGGGTT GCGCCCGGGT
GAGCCCGTGA GGGTCAGCGG CCTGCGCGAT GCCCGGGGAG AAGTCGTGGC GACCCGTATC
GAACGGGCAC CGGGGTTGAG GGAGGCCAGC GCCATCGGCG CGGTTGATCG CACTGGCAGC
CTTCAAGGGT TGAAGTTGGG TACCCGTGTG GCGCCTGCAC GTGAGGTGCT GGTGCGCGGC
CAGTGGACCG GGCGCCAGCT TGAAGTGGCG CAAACCCGTC CAGACCCGAG CCTGCCTTTT
GCTGGTCGTG TCCAGCAGGC GGTGGTTGAA GGGCTGGTAC AGCGCACACA AGCTCGGCAG
TTGGTGGTTG CAGGTCTCAA TGTGACATTG GGGCAGGGCA CCGTAATTGT CGGCCGGCAG
CCAGCGGCCT TGGCGCTTGA TCAACGTGTG CGGGTGAGCG GGGTGCTCAA TGGAACTCAC
GAGCTGCGGG CAACCCGCGT GGAATTCCAG GATGACCGTG TCGACAATCC TGACAGAAGC
CAGTCGGGGC ACGGAGGTGA GCATGACGGA AGCAGCTCCG GCGGCTCCAG CAGCGGTCAT
GGCGCAAGCG ATGGGGCCAG CGAACGCGAT GAAAACAGCA ATGATCACAG TGGGCACAGT
GCCGTTGACG GCTCCAGTGA CCATGGCAGC GGTGACAAGT CGGGAAAGTC GGTACACCTC
GACGCATTGG AGCAATCGAC GCGCAGCAAC AGTGGAAGCT CCGATCGGGT TGAGAAGGTC
GAAGTCGAAA ACACCGGAAA GGTCGAAAAA GTAGACAAGG TCGAGAAGCC CGAGAAAGTC
GAGAAGGTCG AGAAGGTCGA GAAGGTCGAG AAGGTCGAGA AGGTCGAGAA GGTCGAGAAG
GTCGAGAAGG TCGAGAAGGT CGAGAAGGTT GAGAAAGTCG AGAAAGTCGA GAAAGTCGAG
AAAGTCGAGA AAGTCGAGAA GCCCGAGAAA GTAGAAAAAG TAGAAAAGCC TGAGCGGGTC
GAAAAGGTGG AGTTACCAGA GAAAGTTGAA AAGGTGGAGA GGCCGGAAAA GGCAGAGACG
GTGGAAAAAG TCGAGCATCC AGAGCGATCC GGGCGTTAG
 
Protein sequence
MTLPVRYLSA VMFALVFGWN LMAPAEVAAA PVCVSRDEMG MAGAAGQQFP GGIGGTGVRN 
ENGGVGGTGA PVQQRPGGTG GTGAVAEGVD GTYFDQRHGG GGGTGTPILR PGGTGGTGIV
GTITGFASIC VNGMEVHYGK DVPVSENGAP ASSGHLAIGQ VVAVEAFATQ RGLQAGRISI
LNVFEGPLTA LPNASAPLRV MGQPVRLAAG ARVAEGLRPG EPVRVSGLRD ARGEVVATRI
ERAPGLREAS AIGAVDRTGS LQGLKLGTRV APAREVLVRG QWTGRQLEVA QTRPDPSLPF
AGRVQQAVVE GLVQRTQARQ LVVAGLNVTL GQGTVIVGRQ PAALALDQRV RVSGVLNGTH
ELRATRVEFQ DDRVDNPDRS QSGHGGEHDG SSSGGSSSGH GASDGASERD ENSNDHSGHS
AVDGSSDHGS GDKSGKSVHL DALEQSTRSN SGSSDRVEKV EVENTGKVEK VDKVEKPEKV
EKVEKVEKVE KVEKVEKVEK VEKVEKVEKV EKVEKVEKVE KVEKVEKPEK VEKVEKPERV
EKVELPEKVE KVERPEKAET VEKVEHPERS GR