| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1222 |
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| Symbol | |
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| ID | 5194615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1384694 |
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| End bp | 1385437 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585685 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_001266567 |
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| Protein GI | 148546465 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGCCT TTCCCTGCCT TGCGAATTGC CCCATGTCCG AACCCGTCCG CCTGTCCAAA
CGCCTCATCG AGCAGCTCGG CTGCTCCCGC CGCGAGGCCG AGCAGTACAT TGAAGGAGGC
TGGGTAACGG TCGATGGCGT GGTGGTCGAG CAGCCGCAGT TCAAGGTTGA GCAGCAGCGC
GTCGAACTGC TGCCGGGCGC CCGTGCCGAA ACCCTGGAGC CGGTGACCCT GCTGCTGAAC
CAGCCAGCCG GCATGGACAG TGAAGACGCC CGCGCCAGCA TGAACATGGG CAGCCTTAGC
GAGGCCCACC GCGAAGGCGT GCGCGCCCTG CACGGGCATT TTGCCCGGCA GGCCTGCGTG
GCACCGCTGG AGCGTGGCGC CAGCGGCCTG CAGGTGTTTA CCCAGGACTG GCGGGTATCC
CGCAAGATCG AGGCCGACCT GCGTCGCCTG GAGCAGGAGT TCATCATTGA AGTGCGCGGC
GAAACCACCC CCCAGGCGCT GGAACGCCTG GCGCGTGGGG CCATGCGCAA TGACCGCGAG
TTGCCCAAGG CCAAGGCCAG CTGGCAGAAC GAGACACACC TGCGCATGGT GTTGAAAAAC
CCACAACCAG GGCAGATTTC CGAGCTATGC GCCTACCTGC GCCTGGAGCT TTTAGGCATG
CGACGCATTC GCCTGGGTGG TGTGTCGATG GGCAAGCTGC CCTTGGCCCA ATGGCGTTAC
CTGGCTACCT CCGAACGTTT CTAA
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| Protein sequence | MEAFPCLANC PMSEPVRLSK RLIEQLGCSR REAEQYIEGG WVTVDGVVVE QPQFKVEQQR
VELLPGARAE TLEPVTLLLN QPAGMDSEDA RASMNMGSLS EAHREGVRAL HGHFARQACV
APLERGASGL QVFTQDWRVS RKIEADLRRL EQEFIIEVRG ETTPQALERL ARGAMRNDRE
LPKAKASWQN ETHLRMVLKN PQPGQISELC AYLRLELLGM RRIRLGGVSM GKLPLAQWRY
LATSERF
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