Gene Pput_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1218 
Symbol 
ID5191629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1381739 
End bp1383061 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content62% 
IMG OID640585681 
ProductC4-dicarboxylate transporter DctA 
Protein accessionYP_001266563 
Protein GI148546461 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.623958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC GTCAGCCGCT GTACAAATCC CTGTATGTCC AGGTGTTGGT CGCCATCACC 
ATCGGCATCC TGCTCGGCCA CTACTATCCG GAAACGGGCG TTGCCCTCAA ACCCCTGGGT
GACGGCTTCG TCAAACTGAT CAAGATGGTC ATCGCCCCGA TCATCTTCTG TACCGTGGTC
AGCGGCATTG CCGGCATGCA GAGCATGAAG TCGGTCGGCA AAACCGGCGG CTACGCGTTG
CTGTACTTCG AAATCGTCTC CACCATCGCC CTGATCATCG GCCTCGTCGT CGTCAACGTG
GTCAAGCCAG GCGCTGGCAT GCACATCGAC GTCAGCACCC TGAACGCCAG CAGCGTGGCT
GCCTACGCCG CCGCCGGCGC GCAGCAGACT ACCGTCGGCT TCCTGCTTAA CGTCATCCCC
AATACGGTCG TCGGCGCCTT CGCCAACGGC GACATCCTGC AAGTGCTGAT GTTCTCGGTG
CTGTTCGGCT TTGCCCTGCA CCGCCTGGGC AGCTACGGCA AGCCGGTACT GGACATGATC
GACCGCTTCG CCCACGTCAT GTTCAACATC ATCAACATGA TCATGAAGCT GGCCCCGATC
GGCGCTTTCG GCGCCATGGC CTTCACCATT GGCCAGTACG GTGTTGGCTC GCTGGTGCAG
CTGGGCTACC TGATGGCCTG CTTCTACATC ACCTGCCTGC TGTTCGTGCT GGTGGTGCTG
GGCGGTATCT GCCGTGCCCA CGGCTTCAGC GTGATCAAGC TGATCCGCTA CATCCGTGAA
GAACTGCTAA TCGTGCTGGG TACTTCGTCC TCGGAGTCGG CCCTGCCACG CATGCTGGCC
AAGATGGAGC GCCTGGGTGC CAAGAAATCG GTAGTGGGCC TGGTTATCCC GACTGGCTAC
TCGTTCAACC TGGACGGTAC CTCGATCTAC CTGACCATGG CTGCGGTGTT CATCGCTCAG
GCCACTGACA CCACCATGGA CATCACTCAC CAGATCACCC TGCTGCTGGT GCTGCTGGTG
GCTTCCAAGG GTGCTGCCGG CGTTACCGGT TCGGGCTTCA TCGTGCTGGC CGCGACCCTG
TCGGCTGTTG GCCACCTGCC GGTTGCCGGC CTGGCGCTGA TCCTTGGCAT CGACCGCTTC
ATGTCCGAAG CCCGCGCCCT GACCAACCTG GTGGGCAACG CCGTTGCCAC CGTGGTAGTG
GCCAAGTGGG TCAAGGAAAT GGACAACGAC AAGCTGGCTT CGGAACTGGC CTCCGGTGGT
GCGCCGCTGG TCGATACCCG CCCGACGGAC GACCTGGGCG TGGCTGAAGG CCCGGCTCGT
TGA
 
Protein sequence
MTTRQPLYKS LYVQVLVAIT IGILLGHYYP ETGVALKPLG DGFVKLIKMV IAPIIFCTVV 
SGIAGMQSMK SVGKTGGYAL LYFEIVSTIA LIIGLVVVNV VKPGAGMHID VSTLNASSVA
AYAAAGAQQT TVGFLLNVIP NTVVGAFANG DILQVLMFSV LFGFALHRLG SYGKPVLDMI
DRFAHVMFNI INMIMKLAPI GAFGAMAFTI GQYGVGSLVQ LGYLMACFYI TCLLFVLVVL
GGICRAHGFS VIKLIRYIRE ELLIVLGTSS SESALPRMLA KMERLGAKKS VVGLVIPTGY
SFNLDGTSIY LTMAAVFIAQ ATDTTMDITH QITLLLVLLV ASKGAAGVTG SGFIVLAATL
SAVGHLPVAG LALILGIDRF MSEARALTNL VGNAVATVVV AKWVKEMDND KLASELASGG
APLVDTRPTD DLGVAEGPAR