Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1216 |
Symbol | |
ID | 5195512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1379369 |
End bp | 1380046 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640585679 |
Product | two component transcriptional regulator |
Protein accession | YP_001266561 |
Protein GI | 148546459 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGC TGGTGGTCGA GGACGAAGCC CTGCTTCGCC ATCACCTCTA CACCCGCCTG GGCGAAAGCG GCCATGTGGT CGAGGCGGTC GCTGATGCCG AAGAGGCGCT GTACCAGGCC GAGCAGTACC ATTTCGACCT TGCCATCATC GATCTGGGCC TGCCCGGTAT CAGCGGCCTG GAGCTGATCA CGCGTCTGCG CAGCCAGGAC AAGACCTTCC CCATTCTCAT CCTCACAGCC CGTGGCAACT GGCAAGACAA GGTCGAGGGC CTGGCCGCCG GTGCCGACGA CTATCTGGTC AAGCCGTTCC AGTTCGAGGA GCTTGAAGCA CGGCTCAATG CCCTGTTACG CCGCTCCAGT GGTTTCATCC AGTCGACCAT CACCGCTGGC CCCTTGGTAC TTGACCTCAA CCGCAAGCAG GCCACCCTCG ACGAACACGC CTTGGCCCTG ACTGCCTACG AATACCGCAT CCTCGAATAC CTCATGCGCC ATCACCAGCA GGTGGTGGCC AAGGATCGCC TGATGGAACA GTTGTACCCA GGTGACGAAG AGCGCGACCC CAATGTCATC GAAGTGCTGG TTGGCCGCCT GCGCCGCAAG CTTGAAGGCG AGCGCGGCTT CAAACCCATC GACACGGTGC GCGGCCTGGG CTACCTGTTC ACCGAGCGCT GCCGATGA
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Protein sequence | MKLLVVEDEA LLRHHLYTRL GESGHVVEAV ADAEEALYQA EQYHFDLAII DLGLPGISGL ELITRLRSQD KTFPILILTA RGNWQDKVEG LAAGADDYLV KPFQFEELEA RLNALLRRSS GFIQSTITAG PLVLDLNRKQ ATLDEHALAL TAYEYRILEY LMRHHQQVVA KDRLMEQLYP GDEERDPNVI EVLVGRLRRK LEGERGFKPI DTVRGLGYLF TERCR
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