| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1177 |
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| Symbol | |
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| ID | 5193529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1325727 |
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| End bp | 1326614 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585635 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_001266522 |
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| Protein GI | 148546420 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.383553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.478459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTG CACTACCTTC GCTTGGATTC GCCGGCATCG GCCTGATGGG CCTGCCCATG
TGCCGCCGCC TGCTGGCAGC GGGTTATCCG CTGACGGTAT GGAACCGCAG CCCGGACAAA
TGCGCCGCCC TGGTCGCTGC TGGAGCGCGC CTGGCCAGCA GCCCGGCCGA ATTGTGCCGT
GACAGCGACA TGGTACTACT GTGCCTGGCC GACACGGCGG TGGTGCGTGA GGTGGTGTTT
GGCGAGCAAG GCATTGCCCA GGGCGGGCGC AGCGGCCAGT TGCTGATCGA TTTCTCCAGC
CTGGAACCCA CCGCCACCCG TGAAATGGCT GCCGAACTGG CAGCACTGTG CGGCATGGCC
TGGCTGGATG CACCTGTCTC TGGCGGTACG CCCGGTGCCG AAGCGGGCAC GCTGGCGATC
ATGGTGGGCG GTGAAGCGGC CGATCTGCAG CGTGCACGCC CGGTGCTGCA GGTGCTTGGT
CAGCGCGTGA CGCATATGGG CGCGGTGGGC ACGGGGCAGG TGACCAAGGC TTGCAACCAG
ATGATTGTAG CGTGCAATGC CCTGGTAATT GCAGAAGTGG TGGCATTGGC CGAACAGTCG
GGCGTGGACG CGACGCTGAT CGCTGAAGCG CTGGCGGGTG GCTTTGCCGA TTCCAAGCCA
TTGCAGATTC TTGCGCCGCA AATGGCCGAG AGCCGCTTCG AGCCAATCAA GTGGCACGTC
CGCACGCTGC TCAAGGACCT CGATGGCGCG GTCAAGTTTT CCCGCGAGCA AGGCTCGGCG
ACGCCACTCA GTGGCCTTGC CGCGCAACTG ATGCGCTTGC ACGGTAGCCA GGGTTACCTG
CAAAAAGATC CGGCGACCCT GGTTGAGCTG TACCGCAACA AGGTGTGA
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| Protein sequence | MSTALPSLGF AGIGLMGLPM CRRLLAAGYP LTVWNRSPDK CAALVAAGAR LASSPAELCR
DSDMVLLCLA DTAVVREVVF GEQGIAQGGR SGQLLIDFSS LEPTATREMA AELAALCGMA
WLDAPVSGGT PGAEAGTLAI MVGGEAADLQ RARPVLQVLG QRVTHMGAVG TGQVTKACNQ
MIVACNALVI AEVVALAEQS GVDATLIAEA LAGGFADSKP LQILAPQMAE SRFEPIKWHV
RTLLKDLDGA VKFSREQGSA TPLSGLAAQL MRLHGSQGYL QKDPATLVEL YRNKV
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