| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1173 |
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| Symbol | livM |
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| ID | 5193542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1321385 |
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| End bp | 1322641 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585631 |
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| Product | leucine/isoleucine/valine transporter permease subunit |
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| Protein accession | YP_001266518 |
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| Protein GI | 148546416 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.556835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.907427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAA ATCTCAAACA GGCGTTCTTC AGCGCCTTGC TGGTCTGGGC CGTGGCCTTC
CCGGTACTGG GCCTGAAACT GAGCATCGAC GGGATCAGCC TGGTCGTGCA CAGTCAGGGC
TCGTTCACCA TCAGCATCAT CGCCGTGTGT TCGGTGCTGA TGTTCCTGCG CGTGCTGTTC
GACAAGCAGT GGAGTTCGGT GATGGGCCGC CGATCGGATC GCAAGCTGAT CCCCCCGGCA
GTCAGCAACT ACCTCACCCT GCCCAAGACC CAGCGCTACG TCATCATCGG GTTGATCGTG
ATAGCACTGG TATGGCCGTT CTTCGGCTCT CGCGGTGCGG TCGACATCGC CACGCTGATC
CTGATCTACG TGTTGCTGGG CCTGGGCCTG AACATCGTGG TCGGCCTGGC GGGCCTGCTC
GACCTCGGCT ACGTAGGCTT CTATGCCGTC GGTGCCTACA GCTACGCCAT GCTCTCGCAT
TACCTGGGCT GGAGCTTCTG GGTGTGCCTG CCGATTGCCG GCCTGATGGC TGCCACCTTC
GGCTTCCTGC TCGGCTTCCC GGTGCTGCGC CTGCGTGGTG ACTACCTGGC GATCGTGACC
CTCGGTTTCG GTGAGATCAT CCGCCTGTTC CTGCGTAACC TCACCGATTG GACCGGCGGC
CCTAACGGCA TCAGCAACAT CCCCAAGCCG GAGTTCTTCG GCCTGACCTT CGAACGCCGT
GCGGCCGAGG GCATGCAGAC CTTCCACGAG TTCTTCGGGC TGCAATACAA CTCGATCAAC
AAGGTGATCT TCCTGTACCT GGTGGCCCTG CTGCTGGCCC TGCTGGCGTT GTTCGTGATC
AACCGCCTGC TGCGCATGCC GATCGGCCGC GCCTGGGAAG CCCTGCGTGA AGACGAGATC
GCCTGCCGTG CACTGGGCCT GAACCCGACC GTGATCAAGC TCTCGGCATT CACCCTGGGT
GCCTGCTTCG CCGGTTTCGC CGGCAGTTTC TTCGCCGCGC GCCAAGGCCT GGTGACGCCG
GAGTCGTTCA CCTTCATCGA GTCGGCGATC ATCCTCGCCA TCGTCGTGCT GGGTGGCATG
GGCTCACAAC TGGGCGTGAT TCTCGCGGCC ATCGTGATGA TCCTGCTGCC TGAGCTGATG
CGTGAGTTCA GCGAATACCG CATGCTGATG TTCGGTGCGC TGATGGTGTT GATGATGATC
TGGCGTCCGC AAGGCCTGCT GCCTATGCAA CGTCCACACA TGGAGCTGCG TCGATGA
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| Protein sequence | MNRNLKQAFF SALLVWAVAF PVLGLKLSID GISLVVHSQG SFTISIIAVC SVLMFLRVLF
DKQWSSVMGR RSDRKLIPPA VSNYLTLPKT QRYVIIGLIV IALVWPFFGS RGAVDIATLI
LIYVLLGLGL NIVVGLAGLL DLGYVGFYAV GAYSYAMLSH YLGWSFWVCL PIAGLMAATF
GFLLGFPVLR LRGDYLAIVT LGFGEIIRLF LRNLTDWTGG PNGISNIPKP EFFGLTFERR
AAEGMQTFHE FFGLQYNSIN KVIFLYLVAL LLALLALFVI NRLLRMPIGR AWEALREDEI
ACRALGLNPT VIKLSAFTLG ACFAGFAGSF FAARQGLVTP ESFTFIESAI ILAIVVLGGM
GSQLGVILAA IVMILLPELM REFSEYRMLM FGALMVLMMI WRPQGLLPMQ RPHMELRR
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