| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1162 |
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| Symbol | |
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| ID | 5192841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1309762 |
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| End bp | 1311996 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585620 |
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| Product | Beta-agarase |
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| Protein accession | YP_001266507 |
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| Protein GI | 148546405 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCC GCACCCTGCC CGCCGTATTC GCCTTGTTGT GCAGTTCGCC CTTGCTGGCC
GGGCAGCAGA CGCTGTTCAG CTTCGTGCGC CCGGCTTCGG TGGTCAATGT GGCGACGGTG
GATGCCGGCA TGCCGCAGTA CAACGCGGAA CAAACGGCCG AGGGCGAGGT GTTGCGGCGT
GTGGTGTTCA ACCCGGCCCA GCAGCCGACC CTGCGCCTGA GCCCGCAGAG CGGGGTGTGG
GACTGGTCCG CCGGGCAGTT CCTGACCTTG CGCCTGCAAA GTGCCATGGA TTGGGCATTG
ACCGTGGATG TCACCGTGCA AGGCAGTGAT GGCCGCGCCT TGACCAGCCG TATCGACCTG
CCCGCGGGTC CCGCGCAAAC CGTGCTGGTG CCCCTCACGG CCAGTTCGCC GTTGGACCAG
GGCATGCGCG CCGGCCCGCC GATGCCCTGG AACCATGGTG GTCAGCGCCT CCTTTTGACC
AGCAGTGCCG GTGCAGTCGA CCTCAAGCAG GTGACCTCGG TCAGCCTGAG CATCCCCAGC
CCCAAGGTGG CGCAGAGCCT GCTGATCGAG CGTGTCGGTA TCCAGGATGA CGACCAGGCG
TACAGGGCGG CCTACCACGA GCTGATTGAT GCTTATGGCC AGTCGACTCG CGGTAACTGG
CCCGAGAAGG TATCCAGTGA CGAGCAGCTC AAGGCGGCCG ATACCCGTGA ACAGCAACAG
CTCAAGGGCT GGTTGGCAGA GCGCGGCAAG CAGCAGCTGG ACGCTTACGG TGGCCTGGTG
GGCGGTCCGG CCTTTGCAGC CAAGGGCTTC TTTCGCACTG AAAAGCGTGA TGGCCGCTGG
TACCTGGTAA CGCCGGATGG GCACCCGTTC TATTCCCTGG GGGTAAACGC CGTGGCGGCA
GACGGCGGGC GTACGTATGT CGCCGGGCGC GAAGGCATGT TCAAGGCCTT GCCCGCTGAG
GGCGATGCAC TGGCCGCGTT CTATGGCGAA AGCAACAACG ACGATGGCAA TGCCTCGTCG
CAAGGGCGCA ATTTCAAGCA GGGGCGCTGG TTCGACTTCT ACGCCGCCAA CCTGCAGCGT
ACCTATGGCA AACCCTGCCC GCCCGCAGTG GAGGGCCAGC CAGCCGATTG CGCGCCGCCG
GTGCTGGATG CCGACCGCTG GCAGGCGCAT GCGCTTGACC GCCTTCAGGC CTGGGGGTTC
AACACTATTG GCAACTGGAG CGAGCCGGCG CTTGGCCAAG CCAGACGCAT GCCGTATACC
TTGCCGCTGT CGATCGTAGG CGACTACGCC AGCATCAGCA CTGGCATGGA CTGGTGGGGC
CGCATGCCCG ACCCGTTCGA CCCGCGTTTT GCCATGGCCA CCGAACGTGC CGTGGCCATC
GCCGCGCGTG ATCACCGTGA CGACCCTTGG CTCATCGGCT ACTTCGCCGA TAACGAACTG
GCCTGGGCCG CTCCTGGAAG CGACCCCAAG AGCCGTTATG GCCTGGCCTA CGGCACCTTG
CGCCTGACCA CCGACGTGCC AGCCAAACGC GCATTCCTCA AGCAGTTGCG CGACAAGTAT
CGCAACCAGG AAGGGTTGTC CAAGGCCTGG GGCATCGAAC TGACCGCTTG GGAACTCATG
GAAGATCCTG GCTTCGAGGC GCCGTTGCCT GACCCGGAGC ACCCGGAAAT CGAACGTGAC
TACCAGCACT TCCAGCGGGT ATTTGCCGAG ACCTACTTCA AGACCATTTC CGATTCGTTG
AAATGGCATG CGCCCAATCA CATGCTCCTG GGTGGCCGCT ATGCGGTCAG TACACCGGAG
GCGGTCAAGG CCTGTGCCGA GTTCTGCGAT GTTCTGAGCT TCAACTTCTA TACCCTCAAG
CCACAGGACG GCTACGACTT TGCCCGCCTG GCGGAGCTGG ACAAGCCGGT GCTGGTGTCC
GAGTTCCAGT TCGGCTCGCG TGATCGCGGG CCGTTCTGGC CGGGGCCATT GGAGCTGGCG
CGGGAAGAGG ATCGCGGCCC GGCCTATGCA AACTTCCTCA AGGCCGCCAT GGCGCAGCCG
ATGATCGTTG GCGCGCACTG GTTCCAGTAC CTCGACCAAC CGGCCAGCGG TCGCCTGCTC
GATGGTGAGA ACGGCCACCT CGGGTTGGTG GCGATTACCG ATAGGCCCTA TCCAGGGTTT
GTCGATGCCG TGCGCAAAAG CAATCTGCAA ACCATGAACC AACTGCGTGC CGAGCTGGAA
AAACCGGCCC CCTGA
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| Protein sequence | MIRRTLPAVF ALLCSSPLLA GQQTLFSFVR PASVVNVATV DAGMPQYNAE QTAEGEVLRR
VVFNPAQQPT LRLSPQSGVW DWSAGQFLTL RLQSAMDWAL TVDVTVQGSD GRALTSRIDL
PAGPAQTVLV PLTASSPLDQ GMRAGPPMPW NHGGQRLLLT SSAGAVDLKQ VTSVSLSIPS
PKVAQSLLIE RVGIQDDDQA YRAAYHELID AYGQSTRGNW PEKVSSDEQL KAADTREQQQ
LKGWLAERGK QQLDAYGGLV GGPAFAAKGF FRTEKRDGRW YLVTPDGHPF YSLGVNAVAA
DGGRTYVAGR EGMFKALPAE GDALAAFYGE SNNDDGNASS QGRNFKQGRW FDFYAANLQR
TYGKPCPPAV EGQPADCAPP VLDADRWQAH ALDRLQAWGF NTIGNWSEPA LGQARRMPYT
LPLSIVGDYA SISTGMDWWG RMPDPFDPRF AMATERAVAI AARDHRDDPW LIGYFADNEL
AWAAPGSDPK SRYGLAYGTL RLTTDVPAKR AFLKQLRDKY RNQEGLSKAW GIELTAWELM
EDPGFEAPLP DPEHPEIERD YQHFQRVFAE TYFKTISDSL KWHAPNHMLL GGRYAVSTPE
AVKACAEFCD VLSFNFYTLK PQDGYDFARL AELDKPVLVS EFQFGSRDRG PFWPGPLELA
REEDRGPAYA NFLKAAMAQP MIVGAHWFQY LDQPASGRLL DGENGHLGLV AITDRPYPGF
VDAVRKSNLQ TMNQLRAELE KPAP
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