Gene Pput_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1160 
Symbol 
ID5192111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1306975 
End bp1307439 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content64% 
IMG OID640585618 
Producthypothetical protein 
Protein accessionYP_001266505 
Protein GI148546403 
COG category[S] Function unknown 
COG ID[COG5615] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.812737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCCT TTGCCCTGCC CTACACCCTG CATGTTCTGG CCGCACTCGT ATGGGTCGGC 
GGCATGTTCT TCGCCTGGCT GGTGCTGCGC CCGGCAACGG TTGCAGCCCT TGAAGGGCCT
GCCCGCCTGC GCTTGTGGGT GGAAGTTTTC CGACGCTTCT TCGGCTGGGT CTGGCTGGCG
GTGGCGATTT TGGCGATAAG TGGTATCGGC ATGTTGCACA TGCGCTTCAG CGGTTTCGAG
ACAGCGCCCC GGTACGTGCA CGTGATGATC GGTGGCGGGA TCGCCATGTT TGCCTTGTTC
ATGCGCATTC AGGCGTTGCT GCTGCCGGAA TTGAAGGCAG CGGTGCAGGC CGAGGACTGG
CCGGCGGGTG CGGCGGTACT GGGGCGCATT CGGCGGATGG TGGGTGTCAA TCTGCTGCTG
GGGCTGGCAG TGGTGGCGGT GGCCAGTTCG CGACTGGTCA TCTGA
 
Protein sequence
MLAFALPYTL HVLAALVWVG GMFFAWLVLR PATVAALEGP ARLRLWVEVF RRFFGWVWLA 
VAILAISGIG MLHMRFSGFE TAPRYVHVMI GGGIAMFALF MRIQALLLPE LKAAVQAEDW
PAGAAVLGRI RRMVGVNLLL GLAVVAVASS RLVI