Gene Pput_1155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1155 
Symbol 
ID5193887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1303844 
End bp1304320 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content65% 
IMG OID640585613 
Producthypothetical protein 
Protein accessionYP_001266500 
Protein GI148546398 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.805371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.988255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTCT CGGTCTGCCC TTGTGGCAGT GGCAACCTGC TTGACGCCTG CTGCGGGCAT 
TACCATGCCG GTACCCCGGC ACCGGATGCC CAGGCCCTGA TGCGCTCACG CTACAGTGCC
TACGTGCTGG GCCTTGTCGA CTACCTGGTA GCCACCACCC TACCGGCCCA GCAAGCCGGC
CTGGACCGTG CTGCCATGGC CGACTGGAGT GCACAGAGCA CCTGGCTGGG CCTGGAAGTG
GAAAGCGCAG AAGTGCTGGG CGGCCAACCC GAGCACAGCT TCGTCACCTT CACCGCACGC
TGGCACGACC AAGACGGCGA TCATCAGCAC CGCGAACGCT CGGCGTTCGT CCAGCATGCC
GGCCGCTGGT ACTTCATCGA CCCAACGGTC GGGTTGAAGG CCGGGCGCAA CGACCCCTGC
CCCTGCGCCA GCGGGCACAA ATTCAAGAAA TGCTGCGCCA GCTACGTAGG GAACTGA
 
Protein sequence
MSVSVCPCGS GNLLDACCGH YHAGTPAPDA QALMRSRYSA YVLGLVDYLV ATTLPAQQAG 
LDRAAMADWS AQSTWLGLEV ESAEVLGGQP EHSFVTFTAR WHDQDGDHQH RERSAFVQHA
GRWYFIDPTV GLKAGRNDPC PCASGHKFKK CCASYVGN