Gene Pput_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1154 
Symbol 
ID5190212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1303368 
End bp1303871 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content60% 
IMG OID640585612 
Productwater stress/hypersensitive response protein 
Protein accessionYP_001266499 
Protein GI148546397 
COG category[S] Function unknown 
COG ID[COG5608] Conserved secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCC AGCTACGTAG GGAACTGAAC ATGATCAAGC GCACCCGTCT GCTACTGCTC 
GGTGCGCTAC TGGCATGGCT GACGGGCTGT GCCAGTTGGG GTGAGGACTG GCGCGAGCCC
GAAGTGCATC TGGTCGAGGT CGAAACGGTC AAGGCCAGGT TGCTGGAACA GGAGTTCGTG
CTGCACCTGC GGGTCGACAA CCCCAATGAC AGCCGCCTGT TCATTCGCAA CGTGTCGTAT
GCAATACGCC TCAATGACCT GCTACTGGTG CAGGATGAAG CCAGCGTATG GCGCAGCGTG
GGCGGGCATG CACGGCGCAC TTTCAAGATC ACCGCACGAA CCAACCTGTG GCAGCACCTG
AAGCCACTGG CCAAGCTGCT CAGAAGCAAG CAGCCGCTGC ATTACACCCT GCAGGGCGAA
CTGGCGACCG GGTTGCTCAT CCATCGGGAC CTGCACATCT CGCGCAGTGG TGAGATAATC
CCCGGCGATC ACATACCGGA GTAA
 
Protein sequence
MLRQLRRELN MIKRTRLLLL GALLAWLTGC ASWGEDWREP EVHLVEVETV KARLLEQEFV 
LHLRVDNPND SRLFIRNVSY AIRLNDLLLV QDEASVWRSV GGHARRTFKI TARTNLWQHL
KPLAKLLRSK QPLHYTLQGE LATGLLIHRD LHISRSGEII PGDHIPE