| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1151 |
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| Symbol | |
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| ID | 5195159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1300885 |
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| End bp | 1302096 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585609 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001266496 |
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| Protein GI | 148546394 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.146461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.639239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCA CGTTACCGCG GCGCACGTAC CTGTACTTCA CCGCACAGTC GATCAACCTG
ACGACTGCCG TGATGTCGGT GACGATGGCC GCCATTGTCG GGGCTGCGCT GGCGCCTGAT
GCCGCATGGT CCACGGTGCC GTACGGGTTC CAGTTTCTGT GCCTGATGTT GGCAACTTAT
CCGGTCTCCA GGCTGATGAG CCGCATCGGC CGTAAAAAGG CGTTCATGCT GGGCGCGATT
CCCCTGGCGC TGTCTGGCAT CAGCGGCTTT CTGGCGGTGG AGCACCAGCA TTTTCCAACG
CTGGTCCTCA GCCACTCTGC ATTGGGTGTG TACATCGCGT TCGCCAATTT CAACCGGTTC
GCGGCAACCG ACAATCTTTC CCAGGCCTTG AAGCCCAAGG CACTTTCGCT GGTCGTGGCG
GGCGGGGTCA TTGCTGCTGT CGTCGGGCCG ACGCTTACCG AGTGGCTGCG TGACGTGGGT
GGTTACCCCC TGTTTTCGCT GTGTTATGCC GCGTTTGTCG GCCTGGCGTT GCTTTCATTG
TTGATTGCGC TGTGCCTGCC CAACGATGCC GGTAAGGCCA GCGCGGTCAA CAGCGCAGCA
AAGCCGGCCA GTGTCCGTGC CGAGCCGGCA GGCCCGAGCG TGGTTGTGGC AATGGCTGTC
GCTGCGCTGG GCTACGGGAT CATGAACCTG CTGATGATCC AGGCCTCGAT GCACATGAAA
CACATGCACG AGGACTTCAC TGACGTCCGC CTGGCGATCC AGTGGCATGT GATTGCCATG
TTTGCCCCGT CGTTCTTCAC CGGCGCCATC ATCCAGCGGC TGGGTATCAA GACCACCATT
TGCGCGGGCC TGGCCCTGTT GATCGGTTGC TCGGCGATGA ATATCTGGTC GCACAGCTAC
GCCATGATGA CCCTGGCACT GATTGCCCTC GGGCTGGGCT GGAACCTCAC TTACGTAGGC
GGAGGTGCCT TGCTGGCCCA GTCACTGCAG AACAGCCCGG CAGCGATGCA GATGCAGGGC
AAGAACGACC TGGCCATTGC CATTTTTGCC ACCCTCGGCG CATTCAGCCC CTCGTTGTTG
CTGAGCTCGG TTGGCTGGGA CGGTACCAAC GCCATCTGCA TGGTCCTCTG CCTGGGGCTG
CTGGTTGCCA CTGCCGGCCT GCTGCAGAAC AAGGTCGGCC TGCAAACGTC AATGGAAGGT
AGCCGCAAAT GA
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| Protein sequence | MNSTLPRRTY LYFTAQSINL TTAVMSVTMA AIVGAALAPD AAWSTVPYGF QFLCLMLATY
PVSRLMSRIG RKKAFMLGAI PLALSGISGF LAVEHQHFPT LVLSHSALGV YIAFANFNRF
AATDNLSQAL KPKALSLVVA GGVIAAVVGP TLTEWLRDVG GYPLFSLCYA AFVGLALLSL
LIALCLPNDA GKASAVNSAA KPASVRAEPA GPSVVVAMAV AALGYGIMNL LMIQASMHMK
HMHEDFTDVR LAIQWHVIAM FAPSFFTGAI IQRLGIKTTI CAGLALLIGC SAMNIWSHSY
AMMTLALIAL GLGWNLTYVG GGALLAQSLQ NSPAAMQMQG KNDLAIAIFA TLGAFSPSLL
LSSVGWDGTN AICMVLCLGL LVATAGLLQN KVGLQTSMEG SRK
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