| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1145 |
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| Symbol | |
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| ID | 5192987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1292534 |
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| End bp | 1294192 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585603 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_001266490 |
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| Protein GI | 148546388 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.646236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCT TCGCTGCGCT GTTCCTGCGC CTGGACGCGA CCACCTCCAG CAATGCCAAG
CTCGAGGCAC TGCGCGACTA CTTTGACATG GCGCCCGCCG ACGATGCTGC CTGGGCGGTG
TATTTCCTGG CCGGCGGGCG CCCACGCCAA CTGGTGCCCA CCCGCCTTCT ACGCGAACTG
GCAACGGCAC TGGCTGGCCT GCCCGACTGG CTTTTCGAAG AAAGCTATCA GGCCGTGGGC
GACCTGGCCG AGACCATTTC GCTGCTGCTG CCGCTGCACG CCGATGGCAA CGATGAAGGC
CTGGCCACCT GGGTGGAACA GCACTTGCTG CCCCTGCGCG GGCTGCCGCC TGAGCAAGTC
CGCCAGCGCC TGCCGCCGCT CTGGGCCAGG CTGGACCGCG CCAGCCTGAT GCTATGCCTG
AAACTGATCA CTGGCAGCTT TCGCGTGGGC GTGTCAAAGC TGTTGGTCAC CCGCGCCCTG
GCGCAACTGG CCGGGCTGGA CGCCAAACGC GTGGCCCAGC GCCTGGTCGG CTACACCGAT
ATAGGCCATC GCCCCACCGC AGCCAGTTAC CAGAGGCTGA TCGCCCCAGA GTCCGCCGAT
GAACACAACC AGCGTGGCGG CCAGCCCTAC CCCTTCTTCC TGGCCCATCC GCTGCAAGTG
TCCAGCGATC AATTCGATAC CCTGCTCGGG CCACCAAGCG ATTGGCAAAT CGAATGGAAG
TGGGACGGCA TTCGGGCGCA AGTGGTGAAG CGCGATGGCC AGCTGTGGGT GTGGTCACGC
GGCGAAGAAC TGGTTACCGA GCGTTTCCCC GAACTGCATG GCCTGGCACA GACGTTGCCC
GATGGCGTGG TGCTCGATGG CGAGATTCTG GTCTGGAAAC CCGGTGAAAC CGAGACGGAA
CTGGCCGTGC AGCCTTTCGC CTTGCTGCAA CAGCGCATCG GTCGCAAAAC GCTGGGCAAA
AAGCTGCTGA ACGATGCGCC GGTGGTGTTG CAGGCCTACG ACCTGTTGGA GTGGCAGGGC
GATGACTGGC GCAGCCGACC GCAGCACGAA CGCCGAAGCC AGCTGGAACG CCTGGTGGAT
GAACACCCAC TTGCCCCCGT GCTGTTGTCG CCTTTGCTGC AAGGCCCGGA CTGGGCCGAC
CTTGCCCGCC AGCGCGAACA GTCACGCAGC CTGGGCGTGG AAGGGCTGAT GCTGAAGCAG
CGCGAGGCCC TGTACGGCGT GGGGCGCACC AAGGACATGG GCATTTGGTG GAAGTGGAAG
ATCGACCCGT TCAGCGTCGA TGCGGTGCTG ATCTATGCCC AACGCGGCCA CGGCCGCAGG
GCCAGTCTGT ACAGCGACTA CACCTTTGCC GTATGGGATG CACCGGCAGG TACCCCTGGT
CGGGCGTTGG TGCCCTTTGC CAAGGCCTAT TCAGGGCTCA GTGACGAAGA AATGCGCAAG
GTCGACGCCA TCATCCGCAA GACCACGGTG GAAACGTTCG GGCCGGTGCG CAGTGTGACC
CCAACGTTGG TGTTCGAGCT GGGCTTCGAA GGCATCGCCC TGTCCCGGCG CCACAAAAGC
GGTATCGCCG TGCGCTTTCC GCGCATGCTG CGCTGGCGGC TGGACAAGCC GGTGGAGGAG
GCAGATGACC TGGCCACCTT GCAGGCGCTA CTGGCCTGA
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| Protein sequence | MKAFAALFLR LDATTSSNAK LEALRDYFDM APADDAAWAV YFLAGGRPRQ LVPTRLLREL
ATALAGLPDW LFEESYQAVG DLAETISLLL PLHADGNDEG LATWVEQHLL PLRGLPPEQV
RQRLPPLWAR LDRASLMLCL KLITGSFRVG VSKLLVTRAL AQLAGLDAKR VAQRLVGYTD
IGHRPTAASY QRLIAPESAD EHNQRGGQPY PFFLAHPLQV SSDQFDTLLG PPSDWQIEWK
WDGIRAQVVK RDGQLWVWSR GEELVTERFP ELHGLAQTLP DGVVLDGEIL VWKPGETETE
LAVQPFALLQ QRIGRKTLGK KLLNDAPVVL QAYDLLEWQG DDWRSRPQHE RRSQLERLVD
EHPLAPVLLS PLLQGPDWAD LARQREQSRS LGVEGLMLKQ REALYGVGRT KDMGIWWKWK
IDPFSVDAVL IYAQRGHGRR ASLYSDYTFA VWDAPAGTPG RALVPFAKAY SGLSDEEMRK
VDAIIRKTTV ETFGPVRSVT PTLVFELGFE GIALSRRHKS GIAVRFPRML RWRLDKPVEE
ADDLATLQAL LA
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