Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1143 |
Symbol | |
ID | 5191099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1288787 |
End bp | 1291237 |
Gene Length | 2451 bp |
Protein Length | 816 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640585601 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001266488 |
Protein GI | 148546386 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.329309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.589442 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCTG CTACCGACCT CGCCAATGCC TGGTTTGCCA AGCGCGGCTG GAAGCCCTTC GCTTTCCAAC GGCGCGTATG GGCTGCCGTC GAACGGGGCG AGTCCGGTTT GCTGCATGCC AGTACCGGTG CCGGCAAGAC CTATGCGGTC TGGCTCGCTG CACTACGTGC GTTCAAGCCC AGGCCCCAGG GCCGCCACTT GGCCCCCATA CAGGTGGTGT GGGTGACGCC CATGCGTGCC CTGGCCGCCG ACACCGCACG TGCGTTGCAA GCGCCGCTTG ATGAACTCCA GCTGCCTTGG AGCGTAGGGG TGCGCAGCGG CGACACCAAC AGTGCCGAGC GCGCCCGACA GGCCCGGCGG CTACCCAGTG TGCTGATCAC CACCCCCGAA AGCCTGACCC TGCTGCTGAC CCGGGCACAG GCACATGAGG ATTTCGCCAC GCTGCAACTG GTGGTAGTGG ATGAATGGCA CGAGCTGCTT GGCAACAAGC GCGGGGTACA ACTGCAGCTG GCATTGGCGC GCCTGCGGCA TTGGCACCCA GGCCTACCGA CCTGGGGCTT GTCGGCAACG CTCGGCAATC TGCAACACGC ACGGGATGTC TTGCTGCCCC AGGGCGGCCT GCTGGTGCAA GGCCGGCAAG ACAAGGCGCT GCAAGTCGAC ACCCTGCTGC CAGCAGCGAT CGAGCGCTTC CCTTGGGCTG GACACATGGG CCTGAAGATG CTCGACCAGG TCTGTCACGA GATCGATGCC AGTGCCAGTA GCCTGGTGTT CACCAACACC CGCGCCCAGG CAGAAATCTG GTATCAGGCC CTGCTTGAGG CCCGCCCGGA CTGGGCCGGG CTGATCGCCC TGCACCACGC CTCGCTGGCC CGTGATACCC GCGACTGGGT CGAGCGCAGC CTCAAGCAAG GCAGCCTCAA GGCGGTGATC TGCACCTCCA GCCTGGACCT GGGCGTGGAC TTTCTGCCCG TGGAACGGGT GCTGCAAATC GGCTCGGCCA AGGGCATCGC CCGCCTGATG CAGCGGGCGG GTCGCTCAGG ACACGCGCCT GGGCGACGCT CCAGGGTCAC CCTGGTGCCC ACCCATAGCC TGGAACTGGT GGAAGCGGCG GCGGCCCGGC AGGCGCTGAT AGCCGGCCAC ATCGAAGCCC GCTTTTCACC GCGCCTGTGC ATGGACGTGC TGGTACAGCA TCTGGTCAGC ATGGCCTTGG GCAGCGGTTT TCGCCCGGAG CAACTGCTCG CCGAAGTGCG AAGCACCTGG GCCTTTCGCC AGTTGCGCGA CAGCCAATGG CAATGGGCGC TGGACTTCGT CTGCCACGGC GGCAGCTCAC TGACCGCCTA TCCGGACTAC CAGCGCGTCG AGCGCCAGGC CGACGGTGTT TATCGGGTTA CCAGCGAACG CTTGGCACGG CGCCACCGCA TGGGCATCGG CACTATCGTC AGCGATGCCA ACCTGCAACT GAAATACTGG AGCAAGGGCG GCGGCGGGAA AACGCTGGGC ATTGTTGAAG AAGCGTTCAT CGCCCGCCTG CGCCCCGGCG ATACGCTGGT ATTTGCCGGG CGGGTACTGG AGCTGGTGCG CGTGGAAAAC ATGACGGCCT ATGTGCGTCG CAGCACGGCG CGAAAGGCTG CGGTAGCGCG CTGGAACGGC GGGCGCATGC CGCTCTCGAG CGAACTGGCC GAGGCGCTGG TCGAGCAGCT CGATGCTGCC GCCCATGAAC GCTTTGACGG GCCGGAAATG CGGGCAGTAC GCCCGCTGCT TGCGCTTCAG GCGCAGTGGT CAGCCTTACC CACCACAGGC ACACTGCTGG CCGAGACCTT CAAATCCCGC CAGGGCTGGC ACCTGTTCCT GTATCCCTTT GCGGGGCGCA TGGCCAACCT GGGCTTGGCC AATCTGATTG CCTGGCGGGT TAGCCGCGCA CAACCACTGT CGGTATCGAT TGCCGTCAAT GACTACGGAT TCGAACTCCT CAGCCCTGCC CAGGTGGACT GGGCCAGGCA CTTGCCACAA GCGCTCGGCA CCACGGACCT GCTGGAAGAT GTGCTGGCCA GCCTGAATGC CGGGGAAATG GCACTGCGGC GCTTTCGTGA AATTGCCCAG ATTGCCGGCC TGGTGTTTGG TGGCTATCCC GCCGCGCAGA AGAGCACGCG GCAAATCCAG GCCTCCAGCG GGCTGTTCTA TGAGGTGTTT CGCAAGCACG ACGCGGGGAA TTTGCTGCTT GGCCAGGCGC GGGATGAAGT ATTGAGCGAA GAGCTGGAAA TCGAACGGCT GCATCGGCAA CTGCTGAAAA TGAGTGAGTT GCAACTGGAC CTGCGGGCGT TGAAGCGGCC AGGGCCCCTG GCGTTTGCCT TGTTGGTGGA AGGCATGCGC GAGACATTGA GCACCGAGAA GCTGGCAGAC CGCATTGCGC GGATGGTGGC GGAACTGGAA CAAGCGGCGG ACGCGGGATG A
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Protein sequence | MPAATDLANA WFAKRGWKPF AFQRRVWAAV ERGESGLLHA STGAGKTYAV WLAALRAFKP RPQGRHLAPI QVVWVTPMRA LAADTARALQ APLDELQLPW SVGVRSGDTN SAERARQARR LPSVLITTPE SLTLLLTRAQ AHEDFATLQL VVVDEWHELL GNKRGVQLQL ALARLRHWHP GLPTWGLSAT LGNLQHARDV LLPQGGLLVQ GRQDKALQVD TLLPAAIERF PWAGHMGLKM LDQVCHEIDA SASSLVFTNT RAQAEIWYQA LLEARPDWAG LIALHHASLA RDTRDWVERS LKQGSLKAVI CTSSLDLGVD FLPVERVLQI GSAKGIARLM QRAGRSGHAP GRRSRVTLVP THSLELVEAA AARQALIAGH IEARFSPRLC MDVLVQHLVS MALGSGFRPE QLLAEVRSTW AFRQLRDSQW QWALDFVCHG GSSLTAYPDY QRVERQADGV YRVTSERLAR RHRMGIGTIV SDANLQLKYW SKGGGGKTLG IVEEAFIARL RPGDTLVFAG RVLELVRVEN MTAYVRRSTA RKAAVARWNG GRMPLSSELA EALVEQLDAA AHERFDGPEM RAVRPLLALQ AQWSALPTTG TLLAETFKSR QGWHLFLYPF AGRMANLGLA NLIAWRVSRA QPLSVSIAVN DYGFELLSPA QVDWARHLPQ ALGTTDLLED VLASLNAGEM ALRRFREIAQ IAGLVFGGYP AAQKSTRQIQ ASSGLFYEVF RKHDAGNLLL GQARDEVLSE ELEIERLHRQ LLKMSELQLD LRALKRPGPL AFALLVEGMR ETLSTEKLAD RIARMVAELE QAADAG
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