| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1143 |
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| Symbol | |
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| ID | 5191099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1288787 |
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| End bp | 1291237 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585601 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001266488 |
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| Protein GI | 148546386 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.329309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.589442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCTG CTACCGACCT CGCCAATGCC TGGTTTGCCA AGCGCGGCTG GAAGCCCTTC
GCTTTCCAAC GGCGCGTATG GGCTGCCGTC GAACGGGGCG AGTCCGGTTT GCTGCATGCC
AGTACCGGTG CCGGCAAGAC CTATGCGGTC TGGCTCGCTG CACTACGTGC GTTCAAGCCC
AGGCCCCAGG GCCGCCACTT GGCCCCCATA CAGGTGGTGT GGGTGACGCC CATGCGTGCC
CTGGCCGCCG ACACCGCACG TGCGTTGCAA GCGCCGCTTG ATGAACTCCA GCTGCCTTGG
AGCGTAGGGG TGCGCAGCGG CGACACCAAC AGTGCCGAGC GCGCCCGACA GGCCCGGCGG
CTACCCAGTG TGCTGATCAC CACCCCCGAA AGCCTGACCC TGCTGCTGAC CCGGGCACAG
GCACATGAGG ATTTCGCCAC GCTGCAACTG GTGGTAGTGG ATGAATGGCA CGAGCTGCTT
GGCAACAAGC GCGGGGTACA ACTGCAGCTG GCATTGGCGC GCCTGCGGCA TTGGCACCCA
GGCCTACCGA CCTGGGGCTT GTCGGCAACG CTCGGCAATC TGCAACACGC ACGGGATGTC
TTGCTGCCCC AGGGCGGCCT GCTGGTGCAA GGCCGGCAAG ACAAGGCGCT GCAAGTCGAC
ACCCTGCTGC CAGCAGCGAT CGAGCGCTTC CCTTGGGCTG GACACATGGG CCTGAAGATG
CTCGACCAGG TCTGTCACGA GATCGATGCC AGTGCCAGTA GCCTGGTGTT CACCAACACC
CGCGCCCAGG CAGAAATCTG GTATCAGGCC CTGCTTGAGG CCCGCCCGGA CTGGGCCGGG
CTGATCGCCC TGCACCACGC CTCGCTGGCC CGTGATACCC GCGACTGGGT CGAGCGCAGC
CTCAAGCAAG GCAGCCTCAA GGCGGTGATC TGCACCTCCA GCCTGGACCT GGGCGTGGAC
TTTCTGCCCG TGGAACGGGT GCTGCAAATC GGCTCGGCCA AGGGCATCGC CCGCCTGATG
CAGCGGGCGG GTCGCTCAGG ACACGCGCCT GGGCGACGCT CCAGGGTCAC CCTGGTGCCC
ACCCATAGCC TGGAACTGGT GGAAGCGGCG GCGGCCCGGC AGGCGCTGAT AGCCGGCCAC
ATCGAAGCCC GCTTTTCACC GCGCCTGTGC ATGGACGTGC TGGTACAGCA TCTGGTCAGC
ATGGCCTTGG GCAGCGGTTT TCGCCCGGAG CAACTGCTCG CCGAAGTGCG AAGCACCTGG
GCCTTTCGCC AGTTGCGCGA CAGCCAATGG CAATGGGCGC TGGACTTCGT CTGCCACGGC
GGCAGCTCAC TGACCGCCTA TCCGGACTAC CAGCGCGTCG AGCGCCAGGC CGACGGTGTT
TATCGGGTTA CCAGCGAACG CTTGGCACGG CGCCACCGCA TGGGCATCGG CACTATCGTC
AGCGATGCCA ACCTGCAACT GAAATACTGG AGCAAGGGCG GCGGCGGGAA AACGCTGGGC
ATTGTTGAAG AAGCGTTCAT CGCCCGCCTG CGCCCCGGCG ATACGCTGGT ATTTGCCGGG
CGGGTACTGG AGCTGGTGCG CGTGGAAAAC ATGACGGCCT ATGTGCGTCG CAGCACGGCG
CGAAAGGCTG CGGTAGCGCG CTGGAACGGC GGGCGCATGC CGCTCTCGAG CGAACTGGCC
GAGGCGCTGG TCGAGCAGCT CGATGCTGCC GCCCATGAAC GCTTTGACGG GCCGGAAATG
CGGGCAGTAC GCCCGCTGCT TGCGCTTCAG GCGCAGTGGT CAGCCTTACC CACCACAGGC
ACACTGCTGG CCGAGACCTT CAAATCCCGC CAGGGCTGGC ACCTGTTCCT GTATCCCTTT
GCGGGGCGCA TGGCCAACCT GGGCTTGGCC AATCTGATTG CCTGGCGGGT TAGCCGCGCA
CAACCACTGT CGGTATCGAT TGCCGTCAAT GACTACGGAT TCGAACTCCT CAGCCCTGCC
CAGGTGGACT GGGCCAGGCA CTTGCCACAA GCGCTCGGCA CCACGGACCT GCTGGAAGAT
GTGCTGGCCA GCCTGAATGC CGGGGAAATG GCACTGCGGC GCTTTCGTGA AATTGCCCAG
ATTGCCGGCC TGGTGTTTGG TGGCTATCCC GCCGCGCAGA AGAGCACGCG GCAAATCCAG
GCCTCCAGCG GGCTGTTCTA TGAGGTGTTT CGCAAGCACG ACGCGGGGAA TTTGCTGCTT
GGCCAGGCGC GGGATGAAGT ATTGAGCGAA GAGCTGGAAA TCGAACGGCT GCATCGGCAA
CTGCTGAAAA TGAGTGAGTT GCAACTGGAC CTGCGGGCGT TGAAGCGGCC AGGGCCCCTG
GCGTTTGCCT TGTTGGTGGA AGGCATGCGC GAGACATTGA GCACCGAGAA GCTGGCAGAC
CGCATTGCGC GGATGGTGGC GGAACTGGAA CAAGCGGCGG ACGCGGGATG A
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| Protein sequence | MPAATDLANA WFAKRGWKPF AFQRRVWAAV ERGESGLLHA STGAGKTYAV WLAALRAFKP
RPQGRHLAPI QVVWVTPMRA LAADTARALQ APLDELQLPW SVGVRSGDTN SAERARQARR
LPSVLITTPE SLTLLLTRAQ AHEDFATLQL VVVDEWHELL GNKRGVQLQL ALARLRHWHP
GLPTWGLSAT LGNLQHARDV LLPQGGLLVQ GRQDKALQVD TLLPAAIERF PWAGHMGLKM
LDQVCHEIDA SASSLVFTNT RAQAEIWYQA LLEARPDWAG LIALHHASLA RDTRDWVERS
LKQGSLKAVI CTSSLDLGVD FLPVERVLQI GSAKGIARLM QRAGRSGHAP GRRSRVTLVP
THSLELVEAA AARQALIAGH IEARFSPRLC MDVLVQHLVS MALGSGFRPE QLLAEVRSTW
AFRQLRDSQW QWALDFVCHG GSSLTAYPDY QRVERQADGV YRVTSERLAR RHRMGIGTIV
SDANLQLKYW SKGGGGKTLG IVEEAFIARL RPGDTLVFAG RVLELVRVEN MTAYVRRSTA
RKAAVARWNG GRMPLSSELA EALVEQLDAA AHERFDGPEM RAVRPLLALQ AQWSALPTTG
TLLAETFKSR QGWHLFLYPF AGRMANLGLA NLIAWRVSRA QPLSVSIAVN DYGFELLSPA
QVDWARHLPQ ALGTTDLLED VLASLNAGEM ALRRFREIAQ IAGLVFGGYP AAQKSTRQIQ
ASSGLFYEVF RKHDAGNLLL GQARDEVLSE ELEIERLHRQ LLKMSELQLD LRALKRPGPL
AFALLVEGMR ETLSTEKLAD RIARMVAELE QAADAG
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