| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1140 |
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| Symbol | dcd |
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| ID | 5194356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1287245 |
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| End bp | 1287811 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640585598 |
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| Product | deoxycytidine triphosphate deaminase |
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| Protein accession | YP_001266485 |
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| Protein GI | 148546383 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0717] Deoxycytidine deaminase |
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| TIGRFAM ID | [TIGR02274] deoxycytidine triphosphate deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0341669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATCA AATCGGACAA GTGGATTCGC CGCATGGCGC AGGAACACGG CATGATCGAG
CCGTTCGTCG AGCGCCAGGT GCGCGGCGAG CAGGACAACC GCGTGATCTC CTTCGGCGTC
TCCAGCTATG GATACGACGT ACGCTGCGCC GACGAATTCA AGGTGTTCAC CAACATCAAC
TCGGCCACCG TCGACCCGAA AAATTTCGAT GCTGGCAGCT TCGTCGATAT CAAGAGCGAC
GTGTGCATCA TCCCGCCAAA CTCTTTCGCC CTGGCGCGTA CTGTCGAATA TTTCCGCATT
CCCCGTGACG TGCTGACCAT TTGCCTTGGC AAGAGCACCT ACGCCCGGTG CGGCATCATC
GTCAACGTCA CGCCGCTCGA GCCCGAGTGG GAAGGCCACG TGACGTTGGA GTTCTCCAAC
ACCACCACGC TGCCGGCGAA GATCTACGCC AACGAAGGCG TGGCGCAGAT GCTGTTCTTG
CAGTCCGACG AAGAGTGCGA AGTGTCGTAC AAGGACCGTG GCGGCAAATA CCAGGGCCAG
CGCGGCGTCA CGCTGCCGCG TACCTGA
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| Protein sequence | MSIKSDKWIR RMAQEHGMIE PFVERQVRGE QDNRVISFGV SSYGYDVRCA DEFKVFTNIN
SATVDPKNFD AGSFVDIKSD VCIIPPNSFA LARTVEYFRI PRDVLTICLG KSTYARCGII
VNVTPLEPEW EGHVTLEFSN TTTLPAKIYA NEGVAQMLFL QSDEECEVSY KDRGGKYQGQ
RGVTLPRT
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