Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1139 |
Symbol | |
ID | 5191927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1286708 |
End bp | 1286917 |
Gene Length | 210 bp |
Protein Length | 69 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640585597 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_001266484 |
Protein GI | 148546382 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.159877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.955199 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAACC GTCAATCCGG TGTTGTTAAG TGGTTCAACG ATGAGAAAGG CTACGGCTTC ATCACCCCTC AGTCGGGCGA TGACCTGTTC GTGCACTTCA AAGCCATCCA AGCTGACGGC TTCAAAACCC TGAAAGAAGG CCAGGCTGTT ACTTTCGTCG CTACCCGCGG CCAGAAAGGC ATGCAGGCTG AAGAAGTTCA GATCGCCTAA
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Protein sequence | MSNRQSGVVK WFNDEKGYGF ITPQSGDDLF VHFKAIQADG FKTLKEGQAV TFVATRGQKG MQAEEVQIA
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