| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1135 |
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| Symbol | |
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| ID | 5191491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1281541 |
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| End bp | 1282512 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585593 |
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| Product | electron transport complex, RnfABCDGE type, D subunit |
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| Protein accession | YP_001266480 |
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| Protein GI | 148546378 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
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| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.811052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGTC CCGATCCCCG CCTACGCACC AGCATGGGCC TGGTCTTGCT CGCCTGCACG
CCTGGACTGC TGGCGCTGTT GTGGCTGCAT GGCTGGGGCA TGATGCTGAA CCTGTTGCTG
TGCGCCAGTG CCGCGCTGCT GTGCGAGGCA TTGCTGCTGG CACTGCGCAG CCAATCGCTG
AGCCAGGCGC TAAACGACGG CAGCGCACTG GTGACCGCCG TACTGCTGGC GGCCGCCCTG
CCCACCCTGG CGCCATGGTG GCTGCCGGTC ATCGCGGCAA GTGTCGCGAT CGGTATCGGC
AAGCAGGCCT ACGGCGGGGT CGGGCGAAAT CTGTTCAATC CGGCCATGGT GGGTTATGCC
TTCGTGCTGC TCAGCTTCCC GTTGCAGATG AACCATTGGC CTGGGCAGGC CCCTGGCCTG
CTCGACAGCG TGCAGCAGGT GTTCGCTGGG GGCGAACAGA TCGATGCCTG GGCCCGTCCG
ACATTGCTCG ACGGCTTGCG CCACAACCGC AGCCTGACCA TCGACGAGCT GTTCGCCAGC
CATCCGGGCT TTGGCAACAT TGGCGGGGCA GGCAGCGAAT GGGTCAACCT GGCATTCCTG
CTTGGCGGCC TGTTCTTGAT GCAACGCAAG GTGATCAGTT GGCATGCGCC GGCAGGTTTG
CTGGCAGGGC TAGTGGTATT TAGCCTGTTG GGCTGGAACG GTTCGGGGTC GGACTCCAAT
GGCTCGCCTT TGCTGCACCT GTTTTCCGGC TCGACCATGC TGGCAGCCTT CTTCATTGCG
ACCGAGCCAG TGTCCGGCCC CAGAGACGAC TGGGCCAAGC TGTGCTTCGG CGTGGGGACA
GGGGTGCTCA TCTACCTGAT TCGTACATGG GGCAGCTACC CGGATGGCAC CGCGTTCGCC
GTCCTGCTGA TGAACCTTTT GGCACCGGCG CTCGAGCGCA TGGCTGCGCA GCGTCAGCAG
GCAGCCCGAT GA
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| Protein sequence | MSSPDPRLRT SMGLVLLACT PGLLALLWLH GWGMMLNLLL CASAALLCEA LLLALRSQSL
SQALNDGSAL VTAVLLAAAL PTLAPWWLPV IAASVAIGIG KQAYGGVGRN LFNPAMVGYA
FVLLSFPLQM NHWPGQAPGL LDSVQQVFAG GEQIDAWARP TLLDGLRHNR SLTIDELFAS
HPGFGNIGGA GSEWVNLAFL LGGLFLMQRK VISWHAPAGL LAGLVVFSLL GWNGSGSDSN
GSPLLHLFSG STMLAAFFIA TEPVSGPRDD WAKLCFGVGT GVLIYLIRTW GSYPDGTAFA
VLLMNLLAPA LERMAAQRQQ AAR
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