Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1130 |
Symbol | |
ID | 5194432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1277956 |
End bp | 1278438 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640585588 |
Product | hypothetical protein |
Protein accession | YP_001266475 |
Protein GI | 148546373 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.409178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.778652 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCAAG CACAACCTGT CGCCCCGCTG ACGATCATTG CCATCTTCGC GGGGATCATC GAAGCCTCCG CCCTTGCCAC ACTGCCATTT CTCGGCGAGT CCAGCCAAAA GCTCTACACC TGGTTCCTGG TAGGCTTTCC ATTCTTTCTG ACGGCACTGT TCTTTCTGAC GCTCAACTTC AATTACAAGT CGTTCTACAA CCCGCTACCC GACAGCACAG CACAGCCCAA CACGCCAGCA CTGAACAGTG TGGCCACACC CGCGATTTCC AATGATGCCC GTGAGGCGGT ACAGGGCGAG CCTGTCACGT TCATGTTCTC CGGCCCCGAC GCCTATCGCA TGATGGAGCA GCAACTCTTG CACGCACTTG CCCAACCGCC CGAGCCAACG CGAGTCTGGC GCTTTTGCAA TCTGGAGAGA CGTCAATGTG CGCAGCTTTC GATCAGCGCA CTTGAGGGCG ATGATGTGAG CCATCGAAGT TGA
|
Protein sequence | MTQAQPVAPL TIIAIFAGII EASALATLPF LGESSQKLYT WFLVGFPFFL TALFFLTLNF NYKSFYNPLP DSTAQPNTPA LNSVATPAIS NDAREAVQGE PVTFMFSGPD AYRMMEQQLL HALAQPPEPT RVWRFCNLER RQCAQLSISA LEGDDVSHRS
|
| |