Gene Pput_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1130 
Symbol 
ID5194432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1277956 
End bp1278438 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content57% 
IMG OID640585588 
Producthypothetical protein 
Protein accessionYP_001266475 
Protein GI148546373 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.409178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.778652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAG CACAACCTGT CGCCCCGCTG ACGATCATTG CCATCTTCGC GGGGATCATC 
GAAGCCTCCG CCCTTGCCAC ACTGCCATTT CTCGGCGAGT CCAGCCAAAA GCTCTACACC
TGGTTCCTGG TAGGCTTTCC ATTCTTTCTG ACGGCACTGT TCTTTCTGAC GCTCAACTTC
AATTACAAGT CGTTCTACAA CCCGCTACCC GACAGCACAG CACAGCCCAA CACGCCAGCA
CTGAACAGTG TGGCCACACC CGCGATTTCC AATGATGCCC GTGAGGCGGT ACAGGGCGAG
CCTGTCACGT TCATGTTCTC CGGCCCCGAC GCCTATCGCA TGATGGAGCA GCAACTCTTG
CACGCACTTG CCCAACCGCC CGAGCCAACG CGAGTCTGGC GCTTTTGCAA TCTGGAGAGA
CGTCAATGTG CGCAGCTTTC GATCAGCGCA CTTGAGGGCG ATGATGTGAG CCATCGAAGT
TGA
 
Protein sequence
MTQAQPVAPL TIIAIFAGII EASALATLPF LGESSQKLYT WFLVGFPFFL TALFFLTLNF 
NYKSFYNPLP DSTAQPNTPA LNSVATPAIS NDAREAVQGE PVTFMFSGPD AYRMMEQQLL
HALAQPPEPT RVWRFCNLER RQCAQLSISA LEGDDVSHRS