| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1126 |
|---|
| Symbol | |
|---|
| ID | 5191610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 1273289 |
|---|
| End bp | 1273963 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640585584 |
|---|
| Product | ribonuclease T |
|---|
| Protein accession | YP_001266471 |
|---|
| Protein GI | 148546369 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | [TIGR01298] ribonuclease T |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAAG ACCTTTACGA AGACGACCTG GACACCCAAG GCAGCAGCGG TCCTCGCCAC
CCGATGGCCG AGCGCTTCCG CGGCTATCTG CCGGTCGTGG TGGATGTTGA AACCGGTGGT
TTCAACAGCG CTACCGATGC ATTGCTGGAA ATTGCCGCCG TCACCATCGG CATGGACGAG
AAAGGCTTCC TGTTCCCCGA ACACACCTAC TTCCACCGCG TGGAGCCGTT CGAGGGCGCC
AACATCGAGC CGGCCGCACT TGAGTTCACC GGGATCAAGC TGGACCACCC GCTGCGCATG
GCGGTCAGCG AGGAAAGCGC GATGACCGAC ATCTTCCGTG GCGTGCGCAA GGCACTCAAG
GCCAACGGCT GCAAGCGGGC AATTCTGGTC GGCCACAACA GCAGCTTCGA CCTGGGTTTC
CTCAATGCAG CAGTGGCGCG CAATGACCTG AAGCGCAACC CGTTCCACCC GTTCTCCAGC
TTCGACACCG CCACCCTGGC GGGCCTGGCG TATGGCCAGA CCGTGCTGGC ACGAGCCTGC
CAGAGCGCTG ACATCGATTT CGACGGGCGT GAGGCGCACT CGGCACGTTA TGACACCGAG
AAAACGGCTG AGCTGTTCTG CGGCATCGTC AACCGCTGGA AAGAAATGGG CGGCTGGCGC
GATTTCAACG ATTGA
|
|---|
| Protein sequence | MSEDLYEDDL DTQGSSGPRH PMAERFRGYL PVVVDVETGG FNSATDALLE IAAVTIGMDE
KGFLFPEHTY FHRVEPFEGA NIEPAALEFT GIKLDHPLRM AVSEESAMTD IFRGVRKALK
ANGCKRAILV GHNSSFDLGF LNAAVARNDL KRNPFHPFSS FDTATLAGLA YGQTVLARAC
QSADIDFDGR EAHSARYDTE KTAELFCGIV NRWKEMGGWR DFND
|
|---|
| |