Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1120 |
Symbol | |
ID | 5191341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1267523 |
End bp | 1268443 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640585578 |
Product | ornithine carbamoyltransferase |
Protein accession | YP_001266465 |
Protein GI | 148546363 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0078] Ornithine carbamoyltransferase |
TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.105458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCTA GGCACTTTCT CTCCCTGCTG GACTTCACCA CCGACGAATT GCTCGGGGTG ATCCGCCGCG GCATCGAGCT GAAGGACCTG CGCAAGCGAG GCGTGCTGTT CGAACCGCTG AAGAACCGTG TGCTGGGCAT GATCTTCGAA AAGTCCTCGA CCCGTACCCG TGTGTCGTTC GAGGCCGGCA TGATCCAGCT CGGCGGCCAG GCCATCTTCC TGTCGCCCCG CGACACCCAG CTGGGCCGCG GCGAGCCGAT TGGTGACAGC GCCATCGTGC TGTCGAGCAT GGTTGATGTG GTGATGATCC GTACCCACGC CCACAGCACC CTGACCGAGT TCGCCGCCAA GTCGCGTGTG CCAGTGATCA ACGGCCTGTC CGACGAATCG CACCCGTGCC AACTGCTGGC CGACATGCAG ACCTTCGTTG AACACCGCGG CTCGATTCAG GGCAAGACCG TGACCTGGAT CGGCGATGGC TTCAACATGT GCAACTCCTA TATCGAAGCC GCCAGGCAGT TCGATTTCCA GCTGCGCATC GCCTGCCCCG AAGGCTATGA GCCGGATCAA CGCTTCATGG CACTGGGCGG TGACCGCGTG CAGATCATCC GGGATGCCAA GGAAGCTGTG CGTGATGCAC ACCTGGTGGT CACCGATGTC TGGACTTCCA TGGGTCAGGA GGAGGAAACT GCACGGCGCC TGGCGCATTT CGCGCCTTAC CAGGTCACCC GCGAACTGCT CGACCTGGCT GCACCCGATG TCCTCTTCAT GCACTGCCTG CCCGCCCACC GTGGCGAGGA AATCAGCCAG GACCTGCTCG ACGACCCACG TTCGGTCGCC TGGGACGAGG CTGAAAACCG CCTGCATGCA CAGAAGGCGC TTCTCGAATT CCTTGTAGAA CCGGCTTACC ACCACGCATG A
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Protein sequence | MSARHFLSLL DFTTDELLGV IRRGIELKDL RKRGVLFEPL KNRVLGMIFE KSSTRTRVSF EAGMIQLGGQ AIFLSPRDTQ LGRGEPIGDS AIVLSSMVDV VMIRTHAHST LTEFAAKSRV PVINGLSDES HPCQLLADMQ TFVEHRGSIQ GKTVTWIGDG FNMCNSYIEA ARQFDFQLRI ACPEGYEPDQ RFMALGGDRV QIIRDAKEAV RDAHLVVTDV WTSMGQEEET ARRLAHFAPY QVTRELLDLA APDVLFMHCL PAHRGEEISQ DLLDDPRSVA WDEAENRLHA QKALLEFLVE PAYHHA
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