| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1114 |
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| Symbol | glpD |
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| ID | 5195427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1260433 |
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| End bp | 1261971 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585572 |
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| Product | glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_001266459 |
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| Protein GI | 148546357 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.778652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCAGC CAGTTTCGTC CCAGCCCCCA ACAGCCGACT GCTATGACCT TGTCGTGATC
GGCGGTGGCA TCAATGGCGT GGGCATCGCT GCCGACGCCG CTGGTCGCGG CTTGAAGGTC
TTCCTTTGCG AAAAAGACGA CCTGGCCCAA CACACGTCGT CAGCCAGCAG CAAACTGATT
CACGGTGGCC TGCGCTACCT GGAGCACTAC GAGTTTCGCC TCGTACGCGA GGCCTTGGCT
GAACGCGAAG TGCTGCTGGC CAAGGCCCCG CACATCGTCA AACCTATGCG CTTCGTGCTT
CCGCACCGCC CGCACCTGCG CCCTGCATGG ATGATCCGCG CCGGCCTGTT CCTCTACGAC
CACCTGGGCA AGCGCAAGCG CCTGGGCGCC TCGCGTAGCC TTCGCTTCGG CCCGGGCTAC
CCGCTGAAGC CGGCAATCAC CCGCGGCTTC GAATACGCCG ACTGCGCTGT CGATGACGCC
CGCCTGGTAG TACTCAACGC CATGGCGGCC CGTGAGCTTG GCGCACATAT CCACACCCGC
ACCCGCTGCT TGCGCGCCGA ACGTGTAGAG GGCTTGTGGC AGGTAGAACT GCAGCACGCC
GACGGCAGCC TCCAGACGAT CCATGCCCGC GCGCTGGTCA ACGCCGCCGG CCCGTGGGTG
GCCAGCTTCA TCAAGGACGA CCTCAAGCTC GATGCGCCTT ACGGCATCCG CCTGATCCAG
GGCAGCCACA TTATCGTGCC GCGCCTGTAT GAAGGTGAAC ATGCCTACAT TCTGCAGAAT
GAAGACCAGC GCATCGTCTT CTGCATCCCG TACCTGGACC GCTTTACCCT GATCGGCACC
ACTGACCGGG AATACAGCGG CGACCCGGCC GCGGTCGCCA TTACCGAGCA GGAAACACAT
TACCTGTTGA AGGTCGTCAA CGAGCACTTC AACCACCAAC TGAGCCAAGC CGACATCCTG
CATACCTACT CCGGCGTTCG GCCGCTGTGC AACGACGAGT CGGACAACCC TTCGGCGGTG
ACCCGGGACT ACACACTCGC CCTTTCGGCA GAAGCTGGCC AGGCACCGCT GCTGTCGGTG
TTCGGTGGCA AGCTCACCAC CTACCGCAAG CTGGCCGAAT CGGCCATGGC TGAACTCAAG
CCCTTCTTCA CCCAGATGCG CGGCCCCTGG ACCGCCAGTG CGCCACTGCC GGGCGCAGAG
GGCATGACAA CGGTACAGGC GCTGATCGAT GCCGTACTGG CACGGTGCGG CTGGTTGCCT
GTAGACCTGG CCAAACGCTG GGTGCTCACC TATGGCAGCC GTGTGTGGCG ACTGCTCGAT
GGCGTTCACG GCCCCGAAGA CCTCGGGCAG GCTATCGGGG CCGGGCTGTT CACCCGTGAG
GTGGACTACC TGCTGGAGGA GGAATGGGCT GAGCAAACCG CTGACATTAT CTGGCGTCGC
ACCAAGCTGG GCCTGTCGCT GACCGCACAG GAGCAGATAG CCCTGGAGGC GTATCTGCAG
CAAGCCCGCA AGGTGCGCAC GAATAGCCGC GCAGCCTGA
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| Protein sequence | MSQPVSSQPP TADCYDLVVI GGGINGVGIA ADAAGRGLKV FLCEKDDLAQ HTSSASSKLI
HGGLRYLEHY EFRLVREALA EREVLLAKAP HIVKPMRFVL PHRPHLRPAW MIRAGLFLYD
HLGKRKRLGA SRSLRFGPGY PLKPAITRGF EYADCAVDDA RLVVLNAMAA RELGAHIHTR
TRCLRAERVE GLWQVELQHA DGSLQTIHAR ALVNAAGPWV ASFIKDDLKL DAPYGIRLIQ
GSHIIVPRLY EGEHAYILQN EDQRIVFCIP YLDRFTLIGT TDREYSGDPA AVAITEQETH
YLLKVVNEHF NHQLSQADIL HTYSGVRPLC NDESDNPSAV TRDYTLALSA EAGQAPLLSV
FGGKLTTYRK LAESAMAELK PFFTQMRGPW TASAPLPGAE GMTTVQALID AVLARCGWLP
VDLAKRWVLT YGSRVWRLLD GVHGPEDLGQ AIGAGLFTRE VDYLLEEEWA EQTADIIWRR
TKLGLSLTAQ EQIALEAYLQ QARKVRTNSR AA
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