| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1112 |
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| Symbol | |
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| ID | 5190606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1254836 |
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| End bp | 1255753 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640585570 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001266457 |
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| Protein GI | 148546355 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.455507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATCG TTCGTCAATT GCTGGGCGCA GCCATCGCGG CTGCAGTCAT CGCTTCGCCG
GCCATGGCCG AGGAGCTCAC CGGCACCCTG AAGAAGATCA AGGAATCGGG CACCATCACA
CTGGGGCACC GCGACTCCTC CATTCCATTT TCCTACCTGG CCGGCAAACC CGAGCCCGTC
GGTTACTCGC ATGACATCCA GCTGGCCGTC GTCGACGCGC TGAAAAAGCA ACTGGGCACG
GACATCAAGG TCCGCTACAA CCTGGTCACC TCGCAAACCC GTATTCCGCT GGTGCAGAAC
GGCACCGTCG ACCTGGAGTG CGGCTCCACC ACCAACAACG TCGAGCGCCA GCAACAGGTT
GGCTTCTCGG TCGGCATCTT CGAAGTCGGT ACCCGCCTGT TGACCAAGGT CAAGGACGGT
CAGCCGGCAT ACAAAGACTT CCCGGACCTG GCCGGCAAGA ACGTGGTGAC CACCGCCGGT
ACCACCTCCG AGCGCATCCT CAAGGCGATG AACGCCGACA AGCAGATGAA GATGAACGTG
ATTTCCGCCA AGGACCACGG TGAAGCCTTC AACATGCTCG AAAGCGGCCG CGCTGTGGCC
TTCATGATGG ACGACGCCCT GCTCGCCGGT GAAATGGCCA AGGCGCGCAA GCCAGCGGAC
TGGGTCATCA CCGGTACGCC ACAGTCGTAT GAAATCTACG GCTGCATGGT GCGCAAGGAA
GACGCTGCGT TCAAGAAAGC GGTCGACGAC GCCATCGTGG CCTACTTCAA GTCGGGCGAA
GTCAACAAAA GCTACGACAA GTGGTTCCAG CAGCCGATTC CACCAAAGGG CCTGAACCTC
CAGTTCCCGA TGAGCGACGA GCTGAAGAAA CTGATCGCCG AGCCAACCGA CAAGGCTGCG
GACGAGAAGA AGTCCTGA
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| Protein sequence | MRIVRQLLGA AIAAAVIASP AMAEELTGTL KKIKESGTIT LGHRDSSIPF SYLAGKPEPV
GYSHDIQLAV VDALKKQLGT DIKVRYNLVT SQTRIPLVQN GTVDLECGST TNNVERQQQV
GFSVGIFEVG TRLLTKVKDG QPAYKDFPDL AGKNVVTTAG TTSERILKAM NADKQMKMNV
ISAKDHGEAF NMLESGRAVA FMMDDALLAG EMAKARKPAD WVITGTPQSY EIYGCMVRKE
DAAFKKAVDD AIVAYFKSGE VNKSYDKWFQ QPIPPKGLNL QFPMSDELKK LIAEPTDKAA
DEKKS
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